@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : bsu28150: (2016-07-14 )
MMRTIKVGSRRSKLAMTQTKWVIQKLKEINPSFAFEIKEIVTKGDRIVDVTLSKVGGKGLFVKEIEQALLNEEIDMAVHSMKDMPAVLPEGLVIGCIPEREDPRDALISKNRVKLSEMKKGAVIGTSSLRRSAQLLIERPDLTIKWIRGNIDTRLQKLETEDYDAIILAAAGLSRMGWKQDVVTEFLEPERCLPAVGQGALAIECRESDEELLALFSQFTDEYTKRTVLAERAFLNAMEGGCQVPIAGYSVLNGQDEIEMTGLVASPDGKIIFKETVTGNDPEEVGKRCAALMADKGAKDLIDRVKRELDEDGK

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

DPM_A_2(4MLV)
?
[Raw transfer]




DPM_A_2(4MLQ)
?
[Raw transfer]




DPM_A_2(4MLV)
?
[Raw transfer]




DPM_B_2(1YPN)
HEM3_ECOLI
[Raw transfer]




DPM_A_2(1GTK)
HEM3_ECOLI
[Raw transfer]




DPM_A_2(2YPN)
HEM3_ECOLI
[Raw transfer]




DPM_A_2(1GTK)
HEM3_ECOLI
[Raw transfer]




DPM_A_2(1AH5)
HEM3_ECOLI
[Raw transfer]




18W_A_2(4HTG)
HEM3_ARATH
[Raw transfer]




18W_A_2(4HTG)
HEM3_ARATH
[Raw transfer]




DPM_A_3(3ECR)
HEM3_HUMAN
[Raw transfer]




DPM_A_3(3ECR)
HEM3_HUMAN
[Raw transfer]




DPM_B_4(3ECR)
HEM3_HUMAN
[Raw transfer]




DPM_B_2(1PDA)
HEM3_ECOLI
[Raw transfer]




DPM_B_4(3EQ1)
HEM3_HUMAN
[Raw transfer]




DPM_A_3(3EQ1)
HEM3_HUMAN
[Raw transfer]




ACY_C_3(1PDA)
?
[Raw transfer]




DPM_B_2(1PDA)
?
[Raw transfer]




ACY_C_3(1PDA)
HEM3_ECOLI
[Raw transfer]




1 PsiBlast_PDB 86.0570% -46 - C4 -4MLQ 8.8 ?
2 PsiBlast_PDB 85.9570% -44 - C4 -4MLV 9.0 ?
14 HHSearch 85.1670% -29 - C4 -4MLV 9.0 ?
15 HHSearch 76.4346% -53 - C4 -1GTK 8.7 HEM3_ECOLI
5 PsiBlast_PDB 76.3645% -55 - C4 -1PDA 9.5 HEM3_ECOLI
8 PsiBlast_PDB 75.9545% -57 - C4 -1AH5 8.1 HEM3_ECOLI
4 PsiBlast_PDB 75.7645% -61 - C4 -1GTK 8.7 HEM3_ECOLI
6 PsiBlast_PDB 74.4345% -53 - C4 -1YPN 7.8 HEM3_ECOLI
3 PsiBlast_PDB 73.8345% -61 - C4 -2YPN 8.3 HEM3_ECOLI
17 HHSearch 73.4945% 2 - C4 -3ECR 7.8 HEM3_HUMAN
13 PsiBlast_CBE 70.6442% 3 - C4 -3EQ1 8.8 HEM3_HUMAN
9 PsiBlast_PDB 70.4642% 3 - C4 -3EQ1 8.4 HEM3_HUMAN
7 PsiBlast_PDB 70.0442% -6 - C4 -3ECR 7.8 HEM3_HUMAN
12 PsiBlast_CBE 68.8242% -3 - C4 -3ECR 8.5 HEM3_HUMAN
16 HHSearch 64.3140% 46 - C4 -4HTG 9.9 HEM3_ARATH
34 Fugue 61.3849% -71 - C4 -1PDA Error ?
10 PsiBlast_PDB 61.1641% 49 - C4 -4HTG 9.9 HEM3_ARATH
11 PsiBlast_PDB 34.9635%-165 - C4 -3I6V - ? -
42 Fugue 33.0415% 13 - C4 -1US5 - ? -
22 HHSearch 27.0314% -4 - C4 -2X26 - SSUA_ECOLI -