@TOME V2.3
(Nov 2016)

Ref. - - Doc.
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : bsu28270: (2016-07-14 )
MKKRIALLPGDGIGPEVLESATDVLKSVAERFNHEFEFEYGLIGGAAIDEHHNPLPEETVAACKNADAILLGAVGGPKWDQNPSELRPEKGLLSIRKQLDLFANLRPVKVFESLSDASPLKKEYIDNVDFVIVRELTGGLYFGQPSKRYVNTEGEQEAVDTLFYKRTEIERVIREGFKMAAARKGKVTSVDKANVLESSRLWREVAEDVAQEFPDVKLEHMLVDNAAMQLIYAPNQFDVVVTENMFGDILSDEASMLTGSLGMLPSASLSSSGLHLFEPVHGSAPDIAGKGMANPFAAILSAAMLLRTSFGLEEEAKAVEDAVNKVLASGKRTRDLARSEEFSSTQAITEEVKAAIMSENTISNV

Atome Classification :

(51 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

NAD_B_18(4WUO)
LEU3_THET8
[Raw transfer]




NAD_A_4(4WUO)
LEU3_THET8
[Raw transfer]




NAP_D_4(2D1C)
IDH_THET8
[Raw transfer]




NAP_C_3(2D1C)
IDH_THET8
[Raw transfer]




NAP_C_3(2D1C)
IDH_THET8
[Raw transfer]




NAD_B_3(4XXV)
LEU3_BURTA
[Raw transfer]




NAD_X_2(3FMX)
TTUC_PSEPU
[Raw transfer]




CIT_E_5(2D1C)
IDH_THET8
[Raw transfer]




GOL_A_10(4WUO)
LEU3_THET8
[Raw transfer]




CIT_F_6(2D1C)
IDH_THET8
[Raw transfer]




GGG_A_3(3TY3)
LYS12_SCHPO
[Raw transfer]




IPM_B_6(1A05)
LEU3_ACIFR
[Raw transfer]




GOL_B_4(4XXV)
LEU3_BURTA
[Raw transfer]




IPM_A_5(1A05)
LEU3_ACIFR
[Raw transfer]




GOL_B_12(3TY4)
LYS12_SCHPO
[Raw transfer]




IPM_A_5(1A05)
LEU3_ACIFR
[Raw transfer]




IPM_B_9(4Y1P)
?
[Raw transfer]




IPM_A_2(3WZY)
LEU3_SHEON
[Raw transfer]




IPM_A_2(3VKZ)
LEU3_SHEON
[Raw transfer]




IPM_A_2(3VL4)
LEU3_SHEON
[Raw transfer]




IPM_A_2(3WZW)
LEU3_SHEON
[Raw transfer]




IPM_A_2(3VL2)
LEU3_SHEON
[Raw transfer]




IPM_A_3(2Y41)
LEU3_THET8
[Raw transfer]




IPM_A_2(3VL6)
LEU3_SHEON
[Raw transfer]




IPM_A_2(3VL3)
LEU3_SHEON
[Raw transfer]




IPM_A_2(3VL7)
LEU3_SHEON
[Raw transfer]




IPM_A_2(3VMJ)
LEU3_SHEON
[Raw transfer]




IPM_B_5(2Y41)
LEU3_THET8
[Raw transfer]




NAD_A_2(1HEX)
LEU3_THET8
[Raw transfer]




IPM_A_2(3WZX)
LEU3_SHEON
[Raw transfer]




IPM_A_2(3WZV)
?
[Raw transfer]




GOL_A_6(3TY4)
LYS12_SCHPO
[Raw transfer]




GOL_A_6(3TY4)
LYS12_SCHPO
[Raw transfer]




IPM_A_2(3VML)
LEU3_SHEON
[Raw transfer]




IPM_A_3(3VMK)
?
[Raw transfer]




IPM_A_3(3VMK)
?
[Raw transfer]




IPM_B_6(3VMK)
?
[Raw transfer]




2PE_A_5(2Y3Z)
LEU3_THET8
[Raw transfer]




2PE_A_5(2Y3Z)
LEU3_THET8
[Raw transfer]




DEI_A_3(2ZTW)
LEU3_THET8
[Raw transfer]




2PE_A_4(2Y3Z)
LEU3_THET8
[Raw transfer]




NAD_A_2(2ZTW)
LEU3_THET8
[Raw transfer]




EOH_B_19(4WUO)
LEU3_THET8
[Raw transfer]




1 PsiBlast_PDB 92.3575% -87 - C5 -3U1H - ? -
119 HHSearch 92.3377% -88 - C5 -3U1H - ? -
29 PsiBlast_CBE 85.6454%-100 - C5 -1A05 3.8 LEU3_ACIFR
116 HHSearch 85.3453% -87 - C5 -1A05 3.7 LEU3_ACIFR
3 PsiBlast_PDB 85.1365% -90 - C5 -2AYQ - LEU3_BACCO -
23 PsiBlast_CBE 85.0965% -92 - C5 -1V5B - LEU3_BACCO -
8 PsiBlast_PDB 84.9854% -99 - C5 -1A05 3.7 LEU3_ACIFR
24 PsiBlast_CBE 84.7265% -95 - C5 -1V5B - LEU3_BACCO -
22 PsiBlast_CBE 84.6865% -94 - C5 -1V5B - LEU3_BACCO -
25 PsiBlast_CBE 84.3265% -90 - C5 -1V5B - LEU3_BACCO -
121 HHSearch 84.2855% -72 * C5 *3R8W - LEU32_ARATH -
2 PsiBlast_PDB 84.0165% -90 - C5 -1V53 - LEU3_BACCO -
21 PsiBlast_CBE 83.8265% -89 - C5 -1V5B - LEU3_BACCO -
5 PsiBlast_PDB 83.6263% -99 - C5 -1XAC - LEU3_THET8 -
4 PsiBlast_PDB 82.6965% -89 - C5 -1V5B - LEU3_BACCO -
6 PsiBlast_PDB 82.6263% -96 - C5 -1XAD - LEU3_THET8 -
113 HHSearch 82.4055% -86 - C5 -2Y3Z 2.6 LEU3_THET8
42 PsiBlast_CBE 82.1257% -95 - C5 -4F7I - LEU3_THET8 -
56 PsiBlast_CBE 82.0457%-102 - C5 -4WUO 7.8 LEU3_THET8
41 PsiBlast_CBE 81.9757% -94 - C5 -4F7I - LEU3_THET8 -
55 PsiBlast_CBE 81.4857% -99 - C5 -4WUO 8.0 LEU3_THET8
49 PsiBlast_CBE 81.4557% -96 - C5 -2Y41 4.3 LEU3_THET8
33 PsiBlast_CBE 81.2054% -46 - C5 -4XXV 7.9 LEU3_BURTA
48 PsiBlast_CBE 80.6957% -94 - C5 -2Y41 4.3 LEU3_THET8
54 PsiBlast_CBE 79.9457% -94 - C5 -1HEX 7.1 LEU3_THET8
52 PsiBlast_CBE 79.8457% -96 - C5 -2Y3Z 2.5 LEU3_THET8
12 PsiBlast_PDB 79.4754% -24 - C5 -3VKZ 3.3 LEU3_SHEON
53 PsiBlast_CBE 79.3057% -89 - C5 -2ZTW 4.5 LEU3_THET8
38 PsiBlast_CBE 79.1451% -21 - C5 -3VMK 3.3 ?
32 PsiBlast_CBE 79.1354% -24 - C5 -3WZX 4.0 LEU3_SHEON
13 PsiBlast_PDB 78.9954% -24 - C5 -3VL2 3.4 LEU3_SHEON
20 PsiBlast_PDB 78.7754% -22 - C5 -3WZW 3.3 LEU3_SHEON
15 PsiBlast_PDB 78.7254% -23 - C5 -3VL4 3.5 LEU3_SHEON
18 PsiBlast_PDB 78.6154% -26 - C5 -3VMJ 3.2 LEU3_SHEON
17 PsiBlast_PDB 78.4654% -25 - C5 -3VL7 3.0 LEU3_SHEON
120 HHSearch 78.4350% -4 - C5 -3VMK 3.3 ?
19 PsiBlast_PDB 78.4254% -24 - C5 -3WZV 4.4 ?
14 PsiBlast_PDB 78.3154% -24 - C5 -3VL3 3.3 LEU3_SHEON
16 PsiBlast_PDB 78.3054% -22 - C5 -3VL6 3.3 LEU3_SHEON
31 PsiBlast_CBE 78.1154% -23 - C5 -3WZY 3.2 LEU3_SHEON
39 PsiBlast_CBE 78.0750% -17 - C5 -3VML 3.3 LEU3_SHEON
37 PsiBlast_CBE 77.7551% -19 - C5 -3VMK 3.0 ?
124 HHSearch 67.4035% -11 - C5 -3TY4 3.0 LYS12_SCHPO
88 PsiBlast_CBE 66.7134% -45 - C5 -4Y1P 4.4 ?
126 HHSearch 65.1234% -16 - C5 -2D1C 6.8 IDH_THET8
91 PsiBlast_CBE 63.3433% -4 - C5 -3TY3 2.4 LYS12_SCHPO
89 PsiBlast_CBE 63.1333% -3 - C5 -3TY4 3.5 LYS12_SCHPO
90 PsiBlast_CBE 62.3933% -3 - C5 -3TY4 3.0 LYS12_SCHPO
77 PsiBlast_CBE 62.0936% 27 - C5 -3FMX 6.5 TTUC_PSEPU
84 PsiBlast_CBE 61.5333% 30 - C5 -2D1C 5.6 IDH_THET8
85 PsiBlast_CBE 60.6433% 30 - C5 -2D1C 5.6 IDH_THET8