@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : bsu28640: (2016-07-15 )
MEEKLKQLEQEALEQVEAASSLKVVNDIRVQYLGKKGPITEVLRGMGKLSAEERPKMGALANEVRERIANAIADKNEKLEEEEMKQKLAGQTIDVTLPGNPVAVGGRHPLTVVIEEIEDLFIGMGYTVEEGPEVETDYYNFESLNLPKEHPARDMQDSFYITEETLMRTQTSPVQTRTMEKHEGKGPVKIICPGKVYRRDNDDATHSHQFMQIEGLVVDKNISMSDLKGTLELVAKKMFGQDREIRLRPSFFPFTEPSVEVDVTCFKCGGNGCSVCKGTGWIEILGAGMVHPNVLKMAGFDPKEYQGFAFGMGVERIAMLKYGIDDIRHFYTNDVRFISQFKQA

Atome Classification :

(32 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

FYA_A_4(1B7Y)
SYFA_THETH
[Raw transfer]




YSA_A_5(2ALY)
SYFA_THETH
[Raw transfer]




FYA_A_4(1B7Y)
SYFA_THETH
[Raw transfer]




FA5_A_5(1JJC)
SYFA_THET8
[Raw transfer]




FA5_A_3(3CMQ)
SYFM_HUMAN
[Raw transfer]




FA5_A_3(3CMQ)
SYFM_HUMAN
[Raw transfer]




PHE_A_3(4TVA)
SYFA_THETH
[Raw transfer]




PHE_A_4(1B70)
SYFA_THETH
[Raw transfer]




TYR_A_5(2AMC)
SYFA_THETH
[Raw transfer]




200_A_5(2AKW)
SYFA_THETH
[Raw transfer]




GAX_A_4(2RHQ)
SYFA_STAHJ
[Raw transfer]




GAX_A_4(2RHQ)
SYFA_STAHJ
[Raw transfer]




DAH_A_3(3TEH)
SYFA_THETH
[Raw transfer]




MTY_A_3(3HFZ)
SYFA_THET8
[Raw transfer]




30 HHSearch 85.2679% -94 - C1 -2RHQ 7.5 SYFA_STAHJ
1 PsiBlast_PDB 84.8078% -94 - C1 -2RHQ 7.5 SYFA_STAHJ
21 PsiBlast_CBE 83.4778% -93 - C1 -2RHS - SYFA_STAHJ -
2 PsiBlast_PDB 81.0978% -92 - C1 -2RHS - SYFA_STAHJ -
26 PsiBlast_CBE 76.0848% -85 - C1 -3PCO - SYFA_ECOLI -
3 PsiBlast_PDB 75.3553%-112 - C1 -4P71 - SYFA_PSEAE -
5 PsiBlast_PDB 74.4253%-113 - C1 -4P73 - SYFA_PSEAE -
7 PsiBlast_PDB 74.1453%-111 - C1 -4P75 - SYFA_PSEAE -
27 HHSearch 73.7654%-114 - C1 -4P72 - SYFA_PSEAE -
4 PsiBlast_PDB 73.5653%-114 - C1 -4P72 - SYFA_PSEAE -
24 PsiBlast_CBE 73.5353%-113 - C1 -4P73 - SYFA_PSEAE -
22 PsiBlast_CBE 73.3553%-112 - C1 -4P75 - SYFA_PSEAE -
6 PsiBlast_PDB 73.1053%-111 - C1 -4P74 - SYFA_PSEAE -
23 PsiBlast_CBE 72.6653%-112 - C1 -4P74 - SYFA_PSEAE -
25 PsiBlast_CBE 72.4653%-111 - C1 -4P72 - SYFA_PSEAE -
8 PsiBlast_PDB 71.0448%-100 - C1 -3PCO - SYFA_ECOLI -
28 HHSearch 70.6149%-102 - C1 -3PCO - SYFA_ECOLI -
47 Fugue 66.0342% -5 - C1 -1EIY - SYFA_THET8 -
14 PsiBlast_PDB 65.5539% -11 - C1 -2IY5 - SYFA_THETH -
11 PsiBlast_PDB 65.3839% -3 - C1 -1EIY - SYFA_THET8 -
15 PsiBlast_PDB 63.7439% -24 - C1 -3HFZ 3.7 SYFA_THET8
18 PsiBlast_PDB 63.2541% -21 - C1 -2AKW 3.6 SYFA_THETH
20 PsiBlast_PDB 62.8441% -20 - C1 -2AMC 3.6 SYFA_THETH
17 PsiBlast_PDB 62.7539% -23 - C1 -4TVA 3.5 SYFA_THETH
19 PsiBlast_PDB 62.1741% -15 - C1 -2ALY 8.3 SYFA_THETH
50 Fugue 61.8832% 6 - C1 -3CMQ 6.8 SYFM_HUMAN
12 PsiBlast_PDB 61.8639% -14 - C1 -1B70 3.5 SYFA_THETH
13 PsiBlast_PDB 61.5539% -19 - C1 -1JJC 8.5 SYFA_THET8
16 PsiBlast_PDB 60.6439% -17 - C1 -3TEH 3.9 SYFA_THETH
29 HHSearch 60.2543% -13 - C1 -1B7Y 8.9 SYFA_THETH
10 PsiBlast_PDB 59.2139% -14 - C1 -1B7Y 8.9 SYFA_THETH
32 HHSearch 49.2035% 12 - C1 -3CMQ 6.8 SYFM_HUMAN