@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : bsu28720: (2016-07-15 )
MKKARMIVDKEYKIGEVDKRIYGSFIEHMGRAVYEGIYEPDHPEADEDGFRKDVQSLIKELQVPIIRYPGGNFLSGYNWEDGVGPVENRPRRLDLAWQTTETNEVGTNEFLSWAKKVNTEVNMAVNLGTRGIDAARNLVEYCNHPKGSYWSDLRRSHGYEQPYGIKTWCLGNEMDGPWQIGHKTADEYGRLAAETAKVMKWVDPSIELVACGSSNSGMPTFIDWEAKVLEHTYEHVDYISLHTYYGNRDNNLPNYLARSMDLDHFIKSVAATCDYVKAKTRSKKTINLSLDEWNVWYHSNEADKKVEPWITARPILEDIYNFEDALLVGSLLITMLQHADRVKIACLAQLVNVIAPIMTEKGGEAWRQPIFYPYMHASVYGRGESLKPLISSPKYDCSDFTDVPYVDAAVVYSEEEETLTIFAVNKAEDQMETEISLRGFESYQIAEHIVLEHQDIKATNQHNRKNVVPHSNGSSSVSENGLTAHFTPLSWNVIRLKKQS

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

KHO_J_10(1QW8)
IABF_GEOSE
[Raw transfer]




KHO_G_7(1QW8)
IABF_GEOSE
[Raw transfer]




KHP_J_10(1QW9)
IABF_GEOSE
[Raw transfer]




KHP_G_7(1QW9)
IABF_GEOSE
[Raw transfer]




KHP_G_7(1QW9)
IABF_GEOSE
[Raw transfer]




KHP_G_7(1QW9)
IABF_GEOSE
[Raw transfer]




GOL_G_7(1PZ3)
IABF_GEOSE
[Raw transfer]




GOL_J_10(1PZ3)
IABF_GEOSE
[Raw transfer]




AHR_B_10(1PZ2)
IABF_GEOSE
[Raw transfer]




AHR_A_7(1PZ2)
IABF_GEOSE
[Raw transfer]




70 Fugue 94.2772% -73 - C5 -1QW9 5.9 IABF_GEOSE
48 HHSearch 94.1472% -73 * C5 *1QW9 5.9 IABF_GEOSE
1 PsiBlast_PDB 93.8372% -72 - C5 -1PZ3 3.0 IABF_GEOSE
4 PsiBlast_PDB 93.8271% -74 - C5 -1QW9 5.9 IABF_GEOSE
3 PsiBlast_PDB 93.8071% -73 - C5 -1QW8 5.1 IABF_GEOSE
24 PsiBlast_CBE 93.5971% -73 - C5 -1PZ2 3.9 IABF_GEOSE
2 PsiBlast_PDB 93.3371% -74 - C5 -1PZ2 2.7 IABF_GEOSE
23 PsiBlast_CBE 93.1671% -72 - C5 -1QW8 4.6 IABF_GEOSE
22 PsiBlast_CBE 93.0671% -73 - C5 -1QW9 5.9 IABF_GEOSE
21 PsiBlast_CBE 92.5972% -69 - C5 -1PZ3 2.9 IABF_GEOSE
27 PsiBlast_CBE 86.3163% -41 - C5 -2C8N - IABF_CLOTH -
31 PsiBlast_CBE 86.3063% -40 - C5 -2C7F - IABF_CLOTH -
5 PsiBlast_PDB 85.9263% -38 - C5 -2C8N - IABF_CLOTH -
25 PsiBlast_CBE 85.6763% -36 - C5 -2C8N - IABF_CLOTH -
28 PsiBlast_CBE 85.5563% -41 - C5 -2C8N - IABF_CLOTH -
26 PsiBlast_CBE 84.8263% -41 - C5 -2C8N - IABF_CLOTH -
29 PsiBlast_CBE 84.4063% -38 - C5 -2C7F - IABF_CLOTH -
30 PsiBlast_CBE 83.0763% -42 - C5 -2C7F - IABF_CLOTH -
44 PsiBlast_CBE 77.1036% -61 - C5 -3UG3 - ? -
43 PsiBlast_CBE 76.8236% -60 - C5 -3UG3 - ? -