@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : bsu29060: (2016-07-16 )
MTLVIGLTGGIASGKSTVANMLIEKGITVIDADIIAKQAVEKGMPAYRQIIDEFGEDILLSNGDIDRKKLGALVFTNEQKRLALNAIVHPAVRQEMLNRRDEAVANREAFVVLDIPLLFESKLESLVDKIIVVSVTKELQLERLMKRNQLTEEEAVSRIRSQMPLEEKTARADQVIDNSGTLEETKRQLDEIMNSWA

Atome Classification :

(22 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

ATP_A_2(4TTQ)
COAE_LEGPH
[Raw transfer]




ADP_A_3(4I1V)
?
[Raw transfer]




BA3_B_7(1VHT)
COAE_ECOLI
[Raw transfer]




ATP_A_4(1JJV)
COAE_HAEIN
[Raw transfer]




BA3_C_8(1VHT)
COAE_ECOLI
[Raw transfer]




BA3_A_6(1VHT)
COAE_ECOLI
[Raw transfer]




BA3_A_6(1VHT)
COAE_ECOLI
[Raw transfer]




ADP_B_4(4I1V)
?
[Raw transfer]




ADP_A_6(1VHL)
COAE_ECOLI
[Raw transfer]




BU2_A_2(4TTR)
COAE_LEGPH
[Raw transfer]




BU2_A_2(4TTR)
COAE_LEGPH
[Raw transfer]




37 Fugue 88.2536%-137 - C3 -1JJV 8.0 COAE_HAEIN
48 HHSearch 86.7141%-133 - C3 -2IF2 - COAE_AQUAE -
49 HHSearch 86.0633%-135 - C3 -2F6R - -
26 PsiBlast_CBE 83.3740%-120 - C3 -1VHL - COAE_ECOLI -
12 PsiBlast_PDB 83.3533%-133 - C3 -2F6R - -
2 PsiBlast_PDB 83.3435%-139 - C3 -4TTQ 6.2 COAE_LEGPH
52 HHSearch 83.2837%-127 - C3 -1VHT 8.7 COAE_ECOLI
3 PsiBlast_PDB 82.7335%-143 - C3 -4TTR 2.3 COAE_LEGPH
24 PsiBlast_CBE 82.2040%-127 - C3 -1VHT 9.1 COAE_ECOLI
21 PsiBlast_CBE 82.0440%-125 - C3 -1VIY - COAE_ECOLI -
50 HHSearch 82.0236%-143 - C3 -4TTR 2.3 COAE_LEGPH
6 PsiBlast_PDB 81.3240%-127 - C3 -1VIY - COAE_ECOLI -
5 PsiBlast_PDB 80.5140%-129 - C3 -1VHT 9.0 COAE_ECOLI
22 PsiBlast_CBE 80.2340%-126 - C3 -1VIY - COAE_ECOLI -
4 PsiBlast_PDB 79.9440%-128 - C3 -1VHL 7.3 COAE_ECOLI
7 PsiBlast_PDB 79.2740%-128 - C3 -1T3H - COAE_ECOLI -
1 PsiBlast_PDB 78.8535%-127 - C- -4TTP - COAE_LEGPH -
47 HHSearch 78.2434% -73 * C3 *4I1U - ? -
9 PsiBlast_PDB 75.1240% -44 - C3 -2IF2 - COAE_AQUAE -
23 PsiBlast_CBE 75.1040%-123 - C3 -1VHT 8.7 COAE_ECOLI
11 PsiBlast_PDB 72.2035% -9 - C3 -4I1V 3.9 ?
27 PsiBlast_CBE 69.5635% -9 - C3 -4I1V 6.6 ?