@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : bsu29090: (2016-07-16 )
MTERKKLVLVDGNSLAYRAFFALPLLSNDKGVHTNAVYGFAMILMKMLEDEKPTHMLVAFDAGKTTFRHGTFKEYKGGRQKTPPELSEQMPFIRELLDAYQISRYELEQYEADDIIGTLAKSAEKDGFEVKVFSGDKDLTQLATDKTTVAITRKGITDVEFYTPEHVKEKYGLTPEQIIDMKGLMGDSSDNIPGVPGVGEKTAIKLLKQFDSVEKLLESIDEVSGKKLKEKLEEFKDQALMSKELATIMTDAPIEVSVSGLEYQGFNREQVIAIFKDLGFNTLLERLGEDSAEAEQDQSLEDINVKTVTDVTSDILVSPSAFVVEQIGDNYHEEPILGFSIVNETGAYFIPKDIAVESEVFKEWVENDEQKKWVFDSKRAVVALRWQGIELKGAEFDTLLAAYIINPGNSYDDVASVAKDYGLHIVSSDESVYGKGAKRAVPSEDVLSEHLGRKALAIQSLREKLVQELENNDQLELFEELEMPLALILGEMESTGVKVDVDRLKRMGEELGAKLKEYEEKIHEIAGEPFNINSPKQLGVILFEKIGLPVVKKTKTGYSTSADVLEKLADKHDIVDYILQYRQIGKLQSTYIEGLLKVTRPDSHKVHTRFNQALTQTGRLSSTDPNLQNIPIRLEEGRKIRQAFVPSEKDWLIFAADYSQIELRVLAHISKDENLIEAFTNDMDIHTKTAMDVFHVAKDEVTSAMRRQAKAVNFGIVYGISDYGLSQNLGITRKEAGAFIDRYLESFQGVKAYMEDSVQEAKQKGYVTTLMHRRRYIPELTSRNFNIRSFAERTAMNTPIQGSAADIIKKAMIDMAAKLKEKQLKARLLLQVHDELIFEAPKEEIEILEKLVPEVMEHALALDVPLKVDFASGPSWYDAK

Atome Classification :

(75 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

NACID_F_4(1LV5)
DPO1_GEOSE
[Raw transfer]
-
GOL_A_5(4DWI)
?
[Raw transfer]



GOL_A_5(4DSI)
?
[Raw transfer]



SUC_A_4(1U49)
DPO1_GEOSE
[Raw transfer]



SUC_A_4(3EYZ)
DPO1_GEOSE
[Raw transfer]



TTP_A_9(1NJY)
DPO1_GEOSE
[Raw transfer]



NACID_C_3(4B9T)
?
[Raw transfer]
-
NACID_C_3(4DSL)
?
[Raw transfer]
-
SUC_A_6(1NJX)
DPO1_GEOSE
[Raw transfer]



CHAIN_C_2(1NK6)
DPO1_GEOSE
[Raw transfer]
-
CHAIN_C_2(1U47)
DPO1_GEOSE
[Raw transfer]
-
CHAIN_C_2(1NKC)
DPO1_GEOSE
[Raw transfer]
-
NACID_C_2(2HHQ)
?
[Raw transfer]
-
CHAIN_C_2(1U45)
DPO1_GEOSE
[Raw transfer]
-
CHAIN_C_2(1U4B)
DPO1_GEOSE
[Raw transfer]
-
CHAIN_C_2(1U48)
DPO1_GEOSE
[Raw transfer]
-
AF_C_7(1UA0)
?
[Raw transfer]



NACID_C_2(2HHU)
?
[Raw transfer]
-
NACID_C_2(2HW3)
?
[Raw transfer]
-
CHAIN_C_2(1NK4)
DPO1_GEOSE
[Raw transfer]
-
CHAIN_C_2(1NJX)
DPO1_GEOSE
[Raw transfer]
-
CHAIN_C_2(1NK5)
DPO1_GEOSE
[Raw transfer]
-
CHAIN_C_2(1NKE)
DPO1_GEOSE
[Raw transfer]
-
BAP_C_10(1XC9)
DPO1_GEOSE
[Raw transfer]



CHAIN_C_2(1U49)
DPO1_GEOSE
[Raw transfer]
-
NACID_C_3(4B9V)
?
[Raw transfer]
-
CHAIN_C_2(1NKB)
DPO1_GEOSE
[Raw transfer]
-
NACID_C_3(4B9N)
?
[Raw transfer]
-
NACID_C_2(1L5U)
DPO1_GEOSE
[Raw transfer]
-
CHAIN_C_2(1XC9)
DPO1_GEOSE
[Raw transfer]
-
NACID_F_4(1LV5)
DPO1_GEOSE
[Raw transfer]
-
NACID_C_2(1L3V)
DPO1_GEOSE
[Raw transfer]
-
NACID_C_3(2Y1I)
?
[Raw transfer]
-
CHAIN_C_2(1NK7)
DPO1_GEOSE
[Raw transfer]
-
NACID_C_2(2HHX)
DPO1_BACCA
[Raw transfer]
-
NACID_C_2(2HHT)
?
[Raw transfer]
-
AF_C_7(1UA1)
DPO1_GEOSE
[Raw transfer]



NACID_C_3(2Y1J)
?
[Raw transfer]
-
CHAIN_C_2(1NJY)
DPO1_GEOSE
[Raw transfer]
-
NACID_C_3(4O0I)
?
[Raw transfer]
-
CHAIN_C_2(1NJZ)
DPO1_GEOSE
[Raw transfer]
-
NACID_C_2(1L3U)
DPO1_GEOSE
[Raw transfer]
-
NACID_C_2(1L3S)
DPO1_GEOSE
[Raw transfer]
-
MES_I_9(1NK0)
DPO1_GEOSE
[Raw transfer]



NACID_C_2(2HHV)
?
[Raw transfer]
-
NACID_C_3(2XY7)
?
[Raw transfer]
-
CHAIN_C_2(1NJW)
?
[Raw transfer]
-
CHAIN_B_2(4DSI)
?
[Raw transfer]
-
CHAIN_C_2(1UA0)
?
[Raw transfer]
-
NACID_C_2(2HHS)
?
[Raw transfer]
-
NACID_P_2(4XVK)
DPOLN_HUMAN
[Raw transfer]
-
CHAIN_C_3(4DSJ)
?
[Raw transfer]
-
NACID_C_3(4B9U)
?
[Raw transfer]
-
CHAIN_C_2(1NK9)
DPO1_GEOSE
[Raw transfer]
-
NACID_C_2(1L3T)
DPO1_GEOSE
[Raw transfer]
-
NACID_C_3(4B9S)
?
[Raw transfer]
-
NACID_C_2(4DSK)
?
[Raw transfer]
-
CHAIN_C_2(1NK0)
DPO1_GEOSE
[Raw transfer]
-
CHAIN_C_2(1NK8)
DPO1_GEOSE
[Raw transfer]
-
CHAIN_E_5(4DSJ)
?
[Raw transfer]
-
NACID_C_3(4DWI)
?
[Raw transfer]
-
CHAIN_C_2(1UA1)
DPO1_GEOSE
[Raw transfer]
-
NACID_F_6(4DS5)
?
[Raw transfer]
-
NACID_F_6(4DS4)
?
[Raw transfer]
-
NACID_F_6(4DQP)
?
[Raw transfer]
-
NACID_F_6(4DQI)
?
[Raw transfer]
-
NACID_E_5(4DQI)
?
[Raw transfer]
-
NACID_E_5(4DQP)
?
[Raw transfer]
-
105 PsiBlast_CBE 89.6466%-110 - C4 -4DQR - ? -
79 PsiBlast_CBE 89.4466%-107 - C4 -4F2R - ? -
16 PsiBlast_PDB 89.4467% 0 - C- -3TAR - ? -
15 PsiBlast_PDB 89.4467% 0 - C- -3TAQ - ? -
14 PsiBlast_PDB 89.4467% 0 - C- -3TAP - ? -
13 PsiBlast_PDB 89.4467% 0 - C- -3TAN - ? -
38 PsiBlast_CBE 89.2767%-110 - C4 -4DQP 16.7 ?
77 PsiBlast_CBE 89.1466%-107 - C4 -4F2S - ? -
107 PsiBlast_CBE 88.9166%-110 - C4 -4DQQ - ? -
84 PsiBlast_CBE 88.9166%-106 - C4 -4DSF - ? -
81 PsiBlast_CBE 88.9066%-107 - C4 -4EZ9 - ? -
74 PsiBlast_CBE 88.8866%-106 - C4 -4F4K - ? -
40 PsiBlast_CBE 88.8867%-106 - C4 -4DQI 17.5 ?
86 PsiBlast_CBE 88.8166%-108 - C4 -4DSE - ? -
82 PsiBlast_CBE 88.7766%-107 - C4 -4EZ6 - ? -
90 PsiBlast_CBE 88.7066%-104 - C4 -3THV - ? -
92 PsiBlast_CBE 88.6066%-104 - C4 -3PX6 - ? -
76 PsiBlast_CBE 88.5066%-108 - C4 -4F3O - ? -
94 PsiBlast_CBE 88.4266%-108 - C4 -3PX4 - ? -
88 PsiBlast_CBE 88.3566%-103 - C4 -3TI0 - ? -
34 PsiBlast_CBE 87.8167%-107 - C4 -4DS5 11.5 ?
36 PsiBlast_CBE 87.2067%-107 - C4 -4DS4 11.5 ?
67 PsiBlast_CBE 77.5468% 16 - C4 -1L3S 18.1 DPO1_GEOSE
20 PsiBlast_PDB 77.4368% 16 - C4 -2HHQ 11.4 ?
23 PsiBlast_CBE 77.1168% 18 - C4 -2HHV 14.2 ?
21 PsiBlast_CBE 77.0068% 18 - C4 -2HW3 12.2 ?
65 PsiBlast_CBE 76.9968% 18 - C4 -1L3U 13.0 DPO1_GEOSE
49 PsiBlast_CBE 76.9768% 18 - C4 -1NKE 6.9 DPO1_GEOSE
32 PsiBlast_CBE 76.9168% 18 - C4 -1U47 5.1 DPO1_GEOSE
11 PsiBlast_PDB 76.9069% 21 - C4 -4B9V 6.5 ?
100 PsiBlast_CBE 76.8968% 16 - C4 -3EYZ 3.4 DPO1_GEOSE
56 PsiBlast_CBE 76.7968% 16 - C4 -1NK5 13.0 DPO1_GEOSE
59 PsiBlast_CBE 76.7668% 17 - C4 -1NJZ 9.8 DPO1_GEOSE
66 PsiBlast_CBE 76.7468% 18 - C4 -1L3T 12.4 DPO1_GEOSE
12 PsiBlast_PDB 76.6469% 16 - C4 -2XY7 12.7 ?
7 PsiBlast_PDB 76.6369% 22 - C4 -4B9N 7.5 ?
63 PsiBlast_CBE 76.6168% 19 - C4 -1L5U 12.5 DPO1_GEOSE
52 PsiBlast_CBE 76.5968% 17 - C4 -1NK9 5.5 DPO1_GEOSE
55 PsiBlast_CBE 76.5768% 16 - C4 -1NK6 8.4 DPO1_GEOSE
50 PsiBlast_CBE 76.5768% 17 - C4 -1NKC 8.6 DPO1_GEOSE
29 PsiBlast_CBE 76.5368% 19 - C4 -1U4B 10.7 DPO1_GEOSE
57 PsiBlast_CBE 76.5268% 18 - C4 -1NK4 8.2 DPO1_GEOSE
26 PsiBlast_CBE 76.5268% 18 - C4 -2HHS 7.0 ?
53 PsiBlast_CBE 76.5068% 19 - C4 -1NK8 8.4 DPO1_GEOSE
30 PsiBlast_CBE 76.4968% 19 - C4 -1U49 9.0 DPO1_GEOSE
24 PsiBlast_CBE 76.4968% 18 - C4 -2HHU 12.8 ?
27 PsiBlast_CBE 76.4868% 18 - C4 -1UA1 8.1 DPO1_GEOSE
54 PsiBlast_CBE 76.4668% 15 - C4 -1NK7 10.6 DPO1_GEOSE
31 PsiBlast_CBE 76.4568% 19 - C4 -1U48 12.1 DPO1_GEOSE
70 PsiBlast_CBE 76.4468% 19 - C4 -4DWI 9.9 ?
25 PsiBlast_CBE 76.4468% 17 - C4 -2HHT 11.8 ?
61 PsiBlast_CBE 76.4368% 18 - C4 -1NJX 8.5 DPO1_GEOSE
58 PsiBlast_CBE 76.4368% 20 - C4 -1NK0 9.2 DPO1_GEOSE
60 PsiBlast_CBE 76.4268% 18 - C4 -1NJY 13.1 DPO1_GEOSE
8 PsiBlast_PDB 76.4169% 21 - C4 -4B9S 12.2 ?
62 PsiBlast_CBE 76.3868% 19 - C4 -1NJW 6.3 ?
51 PsiBlast_CBE 76.3668% 19 - C4 -1NKB 12.1 DPO1_GEOSE
33 PsiBlast_CBE 76.3268% 17 - C4 -1U45 16.0 DPO1_GEOSE
48 PsiBlast_CBE 76.2268% 19 - C4 -1XC9 7.4 DPO1_GEOSE
64 PsiBlast_CBE 76.1968% 16 - C4 -1L3V 8.2 DPO1_GEOSE
46 PsiBlast_CBE 76.1168% 21 - C4 -4O0I 6.8 ?
71 PsiBlast_CBE 76.1068% 19 - C4 -4DSI 13.9 ?
9 PsiBlast_PDB 76.0869% 18 - C4 -4B9T 6.8 ?
10 PsiBlast_PDB 76.0469% 20 - C4 -4B9U 7.5 ?
28 PsiBlast_CBE 75.8568% 18 - C4 -1UA0 14.0 ?
22 PsiBlast_CBE 75.8468% 16 - C4 -2HHX 13.7 DPO1_BACCA
19 PsiBlast_PDB 75.5968% 20 - C4 -2Y1J 9.5 ?
43 PsiBlast_CBE 75.5568% 18 - C4 -4DSK 14.6 ?
45 PsiBlast_CBE 75.3668% 17 - C4 -4DSJ 10.0 ?
18 PsiBlast_PDB 75.2068% 20 - C4 -2Y1I 9.1 ?
68 PsiBlast_CBE 75.1468% 20 - C4 -1LV5 12.1 DPO1_GEOSE
42 PsiBlast_CBE 75.0668% 19 - C4 -4DSL 10.7 ?
44 PsiBlast_CBE 74.9868% 16 - C4 -4DSJ 8.5 ?
69 PsiBlast_CBE 74.3168% 22 - C4 -1LV5 Error DPO1_GEOSE
144 Fugue 62.2732% -14 - C4 -4XVK 8.1 DPOLN_HUMAN