@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : bsu29130: (2016-07-16 )
MAQGEKITVSNGVLNVPNNPIIPFIEGDGTGPDIWNAASKVLEAAVEKAYKGEKKITWKEVYAGEKAYNKTGEWLPAETLDVIREYFIAIKGPLTTPVGGGIRSLNVALRQELDLFVCLRPVRYFTGVPSPVKRPEDTDMVIFRENTEDIYAGIEYAKGSEEVQKLISFLQNELNVNKIRFPETSGIGIKPVSEEGTSRLVRAAIDYAIEHGRKSVTLVHKGNIMKFTEGAFKNWGYELAEKEYGDKVFTWAQYDRIAEEQGKDAANKAQSEAEAAGKIIIKDSIADIFLQQILTRPNEFDVVATMNLNGDYISDALAAQVGGIGIAPGANINYETGHAIFEATHGTAPKYAGLDKVNPSSVILSGVLLLEHLGWNEAADLVIKSMEKTIASKVVTYDFARLMDGATEVKCSEFGEELIKNMD

Atome Classification :

(43 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

CIT_A_3(1HQS)
IDH_BACSU
[Raw transfer]



ICT_A_3(5ICD)
IDH_ECOLI
[Raw transfer]



ICT_E_5(1PB1)
IDH_ECOLI
[Raw transfer]



ICT_A_4(1CW1)
IDH_ECOLI
[Raw transfer]



ICT_A_3(8ICD)
IDH_ECOLI
[Raw transfer]



ICT_A_4(1P8F)
IDH_ECOLI
[Raw transfer]



ICA_A_3(1AI2)
IDH_ECOLI
[Raw transfer]



ICT_A_3(1GRP)
IDH_ECOLI
[Raw transfer]



ICT_A_3(1GRO)
IDH_ECOLI
[Raw transfer]



ICT_A_2(4BNP)
IDH_ECOLI
[Raw transfer]



ICT_A_4(1CW7)
IDH_ECOLI
[Raw transfer]



OXS_A_3(1IDC)
IDH_ECOLI
[Raw transfer]



CIT_B_4(1HQS)
IDH_BACSU
[Raw transfer]



CIT_F_6(2D1C)
IDH_THET8
[Raw transfer]



AKG_A_4(4AJR)
IDH_ECOLI
[Raw transfer]



AKG_A_3(1BL5)
IDH_ECOLI
[Raw transfer]



AKG_A_4(1CW4)
IDH_ECOLI
[Raw transfer]



IPM_A_4(1HJ6)
IDH_ECOLI
[Raw transfer]



AKG_A_3(1IKA)
IDH_ECOLI
[Raw transfer]



NAP_A_2(4AJ3)
IDH_ECOLI
[Raw transfer]



NAP_A_3(4AJR)
IDH_ECOLI
[Raw transfer]



NAP_C_3(2D1C)
IDH_THET8
[Raw transfer]



NAP_A_2(1AI2)
IDH_ECOLI
[Raw transfer]



NAP_A_3(2E5M)
?
[Raw transfer]



NAP_D_4(2D1C)
IDH_THET8
[Raw transfer]



NAP_B_4(2E5M)
?
[Raw transfer]



TAP_A_2(4AJA)
IDH_ECOLI
[Raw transfer]



NAP_A_5(1HJ6)
IDH_ECOLI
[Raw transfer]



TAP_A_2(4AJB)
IDH_ECOLI
[Raw transfer]



NDO_A_2(1AI3)
IDH_ECOLI
[Raw transfer]



NAP_B_7(1XKD)
?
[Raw transfer]



NAP_A_4(1IDE)
IDH_ECOLI
[Raw transfer]



GOL_A_6(3TY4)
LYS12_SCHPO
[Raw transfer]



NAP_A_5(1XKD)
?
[Raw transfer]



A2P_A_2(4AJS)
IDH_ECOLI
[Raw transfer]



NAP_C_3(9ICD)
IDH_ECOLI
[Raw transfer]



A2P_A_2(4AJC)
IDH_ECOLI
[Raw transfer]



AMP_I_9(1ISO)
IDH_ECOLI
[Raw transfer]



TRS_A_2(2Y3Z)
LEU3_THET8
[Raw transfer]
21 PsiBlast_CBE 93.1399% -80 - C7 -1HQS 3.2 IDH_BACSU
71 HHSearch 92.78100% -79 - C7 -1HQS 4.0 IDH_BACSU
1 PsiBlast_PDB 92.5899% -79 - C7 -1HQS - IDH_BACSU -
36 PsiBlast_CBE 73.4260% 12 - C7 -2D4V - ? -
39 PsiBlast_CBE 73.4156% -87 - C7 -2IV0 - IDH_ARCFU -
35 PsiBlast_CBE 73.3560% 11 - C7 -2D4V - ? -
37 PsiBlast_CBE 73.2660% 11 - C7 -2D4V - ? -
72 HHSearch 73.0961% 12 - C7 -2D4V - ? -
76 HHSearch 73.0658% -85 - C7 -2IV0 - IDH_ARCFU -
38 PsiBlast_CBE 73.0460% 12 - C7 -2D4V - ? -
40 PsiBlast_CBE 73.0356% -84 - C7 -2IV0 - IDH_ARCFU -
31 PsiBlast_CBE 71.1766% 6 - C7 -1CW1 4.1 IDH_ECOLI
4 PsiBlast_PDB 71.1766% 11 - C7 -1PB1 4.0 IDH_ECOLI
5 PsiBlast_PDB 71.0966% 10 - C7 -1PB3 - IDH_ECOLI -
15 PsiBlast_PDB 71.0766% 7 - C7 -4AJA 6.7 IDH_ECOLI
28 PsiBlast_CBE 70.9466% 8 - C7 -4AJB 6.7 IDH_ECOLI
25 PsiBlast_CBE 70.8766% 7 - C7 -4AJS 5.6 IDH_ECOLI
27 PsiBlast_CBE 70.7966% 8 - C7 -4AJC 4.8 IDH_ECOLI
30 PsiBlast_CBE 70.7666% 7 - C7 -1CW4 3.1 IDH_ECOLI
3 PsiBlast_PDB 70.7466% 9 - C7 -1P8F 3.3 IDH_ECOLI
18 PsiBlast_PDB 70.7066% 8 - C7 -1IDE 5.8 IDH_ECOLI
6 PsiBlast_PDB 70.7066% 7 - C7 -1AI2 6.9 IDH_ECOLI
14 PsiBlast_PDB 70.6966% 6 - C7 -4AJ3 8.8 IDH_ECOLI
29 PsiBlast_CBE 70.6866% 7 - C7 -1IDC 2.5 IDH_ECOLI
43 PsiBlast_CBE 70.6448% -73 - C7 -1XKD 6.8 ?
24 PsiBlast_CBE 70.6466% 4 - C7 -4BNP 4.3 IDH_ECOLI
23 PsiBlast_CBE 70.6166% 7 - C7 -1CW7 3.2 IDH_ECOLI
26 PsiBlast_CBE 70.6066% 7 - C7 -4AJR 8.9 IDH_ECOLI
19 PsiBlast_PDB 70.6066% 9 - C7 -1HJ6 8.3 IDH_ECOLI
2 PsiBlast_PDB 70.5166% 13 - C7 -1BL5 3.7 IDH_ECOLI
7 PsiBlast_PDB 70.3066% 11 - C7 -1AI3 6.2 IDH_ECOLI
42 PsiBlast_CBE 70.1449% -85 - C7 -2E5M 7.1 ?
12 PsiBlast_PDB 69.9566% 10 - C7 -9ICD 4.8 IDH_ECOLI
22 PsiBlast_CBE 69.9166% 10 - C7 -8ICD 3.6 IDH_ECOLI
34 PsiBlast_CBE 69.8865% 10 - C7 -1ISO 3.6 IDH_ECOLI
32 PsiBlast_CBE 69.8366% 11 - C7 -1GRP 3.3 IDH_ECOLI
11 PsiBlast_PDB 69.6466% 12 - C7 -5ICD 3.5 IDH_ECOLI
33 PsiBlast_CBE 69.1965% 13 - C7 -1GRO 3.0 IDH_ECOLI
41 PsiBlast_CBE 69.0449% -84 - C7 -2E5M 7.2 ?
44 PsiBlast_CBE 68.8048% -71 - C7 -1XKD 7.5 ?
8 PsiBlast_PDB 68.7266% 9 - C7 -1IKA 2.5 IDH_ECOLI
46 PsiBlast_CBE 51.1935% 0 - C7 -2D1C 8.3 IDH_THET8
47 PsiBlast_CBE 50.8635% -0 - C7 -2D1C 8.2 IDH_THET8