@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : bsu29470: (2016-07-17 )
MSKIIAINAGSSSLKFQLFEMPSETVLTKGLVERIGIADSVFTISVNGEKNTEVTDIPDHAVAVKMLLNKLTEFGIIKDLNEIDGIGHRVVHGGEKFSDSVLLTDETIKEIEDISELAPLHNPANIVGIKAFKEVLPNVPAVAVFDTAFHQTMPEQSYLYSLPYEYYEKFGIRKYGFHGTSHKYVTERAAELLGRPLKDLRLISCHLGNGASIAAVEGGKSIDTSMGFTPLAGVAMGTRSGNIDPALIPYIMEKTGQTADEVLNTLNKKSGLLGISGFSSDLRDIVEATKEGNERAETALEVFASRIHKYIGSYAARMSGVDAIIFTAGIGENSVEVRERVLRGLEFMGVYWDPALNNVRGEEAFISYPHSPVKVMIIPTDEEVMIARDVVRLAK

Atome Classification :

(35 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

AQP_A_4(4FWN)
TDCD_SALTY
[Raw transfer]




ATP_A_6(4FWM)
TDCD_SALTY
[Raw transfer]




B4P_A_2(2E1Z)
TDCD_SALTY
[Raw transfer]




B4P_A_2(2E20)
TDCD_SALTY
[Raw transfer]




ANP_A_4(4XH5)
TDCD_SALTY
[Raw transfer]




ANP_E_5(1X3N)
TDCD_SALTY
[Raw transfer]




ANP_A_2(4XH4)
TDCD_SALTY
[Raw transfer]




ANP_A_2(4XH4)
TDCD_SALTY
[Raw transfer]




ADP_F_6(1G99)
ACKA_METTE
[Raw transfer]




CTP_A_6(4FWS)
TDCD_SALTY
[Raw transfer]




GTP_A_4(4FWQ)
TDCD_SALTY
[Raw transfer]




ADP_E_5(1G99)
ACKA_METTE
[Raw transfer]




ADP_E_5(1G99)
ACKA_METTE
[Raw transfer]




ANP_A_5(4XH1)
TDCD_SALTY
[Raw transfer]




ADP_E_5(1G99)
ACKA_METTE
[Raw transfer]




GDP_A_4(4FWP)
TDCD_SALTY
[Raw transfer]




ADP_C_3(1X3M)
TDCD_SALTY
[Raw transfer]




AMP_B_8(4IJN)
ACKA_MYCS2
[Raw transfer]




ADP_E_5(1TUU)
ACKA_METTE
[Raw transfer]




AMP_F_6(1TUU)
ACKA_METTE
[Raw transfer]




APC_A_3(4IZ9)
ACKA_MYCA1
[Raw transfer]




AMP_A_4(4IJN)
ACKA_MYCS2
[Raw transfer]




AMP_A_4(4IJN)
ACKA_MYCS2
[Raw transfer]




ADP_A_4(1TUY)
ACKA_METTE
[Raw transfer]




AMP_A_3(4FWK)
TDCD_SALTY
[Raw transfer]




ADP_B_5(1TUY)
ACKA_METTE
[Raw transfer]




5GP_A_5(4FWO)
TDCD_SALTY
[Raw transfer]




C5P_A_4(4FWR)
TDCD_SALTY
[Raw transfer]




PGE_B_6(3R9P)
ACKA_MYCPA
[Raw transfer]




PGE_A_5(3R9P)
ACKA_MYCPA
[Raw transfer]




PGE_A_5(3R9P)
ACKA_MYCPA
[Raw transfer]




EDO_A_2(4FWL)
TDCD_SALTY
[Raw transfer]




EDO_A_2(4FWQ)
TDCD_SALTY
[Raw transfer]




ACY_B_7(1TUY)
ACKA_METTE
[Raw transfer]




28 PsiBlast_CBE 84.5342%-113 - C6 -3R9P 2.0 ACKA_MYCPA
38 HHSearch 84.3346%-115 * C6 *4XH4 6.5 TDCD_SALTY
43 HHSearch 83.8043%-111 - C6 -3R9P 2.0 ACKA_MYCPA
42 HHSearch 83.6858% -13 - C6 -2IIR - ACKA_THEMA -
44 HHSearch 83.5944%-107 - C6 -4IJN 6.6 ACKA_MYCS2
27 PsiBlast_CBE 83.2542%-113 - C6 -3R9P 2.6 ACKA_MYCPA
1 PsiBlast_PDB 83.0458% -14 - C6 -2IIR - ACKA_THEMA -
26 PsiBlast_CBE 82.6942%-116 - C6 -3P4I - ACKA_MYCA1 -
56 Fugue 82.4755% -19 - C6 -1G99 6.0 ACKA_METTE
25 PsiBlast_CBE 82.3642%-115 - C6 -4IZ9 5.7 ACKA_MYCA1
36 HHSearch 82.1955% -19 - C6 -1G99 6.0 ACKA_METTE
4 PsiBlast_PDB 80.7056% -17 - C6 -1G99 6.0 ACKA_METTE
23 PsiBlast_CBE 79.7256% -20 - C6 -1G99 6.4 ACKA_METTE
21 PsiBlast_CBE 79.4956% -20 - C6 -1TUY 4.5 ACKA_METTE
2 PsiBlast_PDB 79.4956% -18 - C6 -1TUU 5.8 ACKA_METTE
3 PsiBlast_PDB 79.4656% -18 - C6 -1TUY 5.5 ACKA_METTE
22 PsiBlast_CBE 79.3056% -16 - C6 -1TUU 5.0 ACKA_METTE
8 PsiBlast_PDB 75.6246% -25 - C6 -4XH1 5.6 TDCD_SALTY
30 PsiBlast_CBE 75.3742% -34 - C6 -4IJN 6.6 ACKA_MYCS2
17 PsiBlast_PDB 75.2046% -24 - C6 -4FWP 6.2 TDCD_SALTY
29 PsiBlast_CBE 75.1242% -32 - C6 -4IJN 6.4 ACKA_MYCS2
5 PsiBlast_PDB 75.1146% -21 - C6 -4XH4 6.5 TDCD_SALTY
14 PsiBlast_PDB 74.9846% -23 - C6 -4FWK 5.4 TDCD_SALTY
15 PsiBlast_PDB 74.8546% -23 - C6 -4FWN 7.8 TDCD_SALTY
18 PsiBlast_PDB 74.8046% -20 - C6 -4FWQ 6.2 TDCD_SALTY
13 PsiBlast_PDB 74.7446% -21 - C6 -2E20 9.6 TDCD_SALTY
12 PsiBlast_PDB 74.7146% -23 - C6 -2E1Z 9.5 TDCD_SALTY
16 PsiBlast_PDB 74.5546% -26 - C6 -4FWO 5.8 TDCD_SALTY
6 PsiBlast_PDB 74.5546% -22 - C6 -4FWL 2.1 TDCD_SALTY
20 PsiBlast_PDB 74.5446% -22 - C6 -4FWS 5.8 TDCD_SALTY
19 PsiBlast_PDB 74.5146% -23 - C6 -4FWR 3.9 TDCD_SALTY
9 PsiBlast_PDB 74.2646% -21 - C6 -1X3M 5.5 TDCD_SALTY
7 PsiBlast_PDB 74.2146% -24 - C6 -4FWM 6.1 TDCD_SALTY
10 PsiBlast_PDB 73.8546% -23 - C6 -1X3N 6.0 TDCD_SALTY
24 PsiBlast_CBE 64.1346% -23 - C6 -4XH5 7.5 TDCD_SALTY