@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : bsu29490: (2016-07-17 )
MAEITFKGGPVTLVGQEVKVGDQAPDFTVLTNSLEEKSLADMKGKVTIISVIPSIDTGVCDAQTRRFNEEAAKLGDVNVYTISADLPFAQARWCGANGIDKVETLSDHRDMSFGEAFGVYIKELRLLARSVFVLDENGKVVYAEYVSEATNHPNYEKPIEAAKALVK

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

CIT_A_3(3I43)
TPX_ECOLI
[Raw transfer]



CIT_A_3(3HVS)
TPX_ECOLI
[Raw transfer]



CIT_B_4(3HVS)
TPX_ECOLI
[Raw transfer]



CIT_B_4(3I43)
TPX_ECOLI
[Raw transfer]



PG4_B_13(3P7X)
?
[Raw transfer]



PG4_C_20(3P7X)
?
[Raw transfer]



PG4_B_11(3P7X)
?
[Raw transfer]



PG4_D_22(3P7X)
?
[Raw transfer]
2 PsiBlast_PDB 95.63100% -99 - C1 -2JSZ - TPX_BACSU -
44 HHSearch 93.70100%-112 - C1 -2JSY - TPX_BACSU -
1 PsiBlast_PDB 93.70100%-112 - C1 -2JSY - TPX_BACSU -
23 PsiBlast_CBE 82.8361% -91 - C1 -3P7X 2.1 ?
21 PsiBlast_CBE 82.7061% -90 - C1 -3P7X 1.7 ?
45 HHSearch 82.1562% -89 - C1 -3P7X - ? -
3 PsiBlast_PDB 81.8961% -88 - C1 -3P7X - ? -
22 PsiBlast_CBE 81.2061% -85 - C1 -3P7X 2.2 ?
49 HHSearch 78.4553% -97 - C1 -1PSQ - TPX_STRPN -
4 PsiBlast_PDB 75.6752% -97 - C1 -1PSQ - TPX_STRPN -
16 PsiBlast_PDB 73.3741% -90 - C1 -4AF2 - TPX_ECOLI -
66 Fugue 71.7154% -49 * C1 *1PSQ - TPX_STRPN -
27 PsiBlast_CBE 71.4142% -76 - C1 -3I43 2.9 TPX_ECOLI
29 PsiBlast_CBE 71.1741% -75 - C1 -3HVX - TPX_ECOLI -
7 PsiBlast_PDB 71.1544% -70 - C1 -3ZRD - ? -
13 PsiBlast_PDB 70.4942% -77 - C1 -3I43 2.6 TPX_ECOLI
31 PsiBlast_CBE 70.4541% -74 - C1 -3HVX - TPX_ECOLI -
30 PsiBlast_CBE 70.4141% -72 - C1 -3HVX - TPX_ECOLI -
28 PsiBlast_CBE 70.3742% -75 - C1 -3HVS 3.2 TPX_ECOLI
12 PsiBlast_PDB 70.3342% -77 - C1 -3HVS 2.7 TPX_ECOLI