@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : bsu29560: (2016-07-17 )
MLKREDLIAPVQYNLVNEMEKFSAAGQKTALLWEDESGKQESWSYEKLMEETNKIGAALADLGFKKGDKLIVMVPRVLEAYAVYLAILKSGMVVIPCSEMLRAKDLEYRIEHAEVKGAIVYSEFIGAFRDVSTADKLITLSIGENDAGWKNLLSIEADGSQFKTADTTRDDMAFLSYTSGTTGQPKGVVHTHGWAFAHLKTSAGAWLDISEKDIVWATAAPGWQKWVWSPFLAVLGSGATGFVYHGRFKAEKYLELLNRYKINVFCCTPTEYRLMAKVEGLKRFDLSALHSAVSAGEPLNREVIDVFQKHFGIKVRDGYGQTESTLLVGVLKDTPIKPGSMGKPTPGNQVEIINEDGEICKPGEVGDIAVHLSTPALFKEYFKDPERMKTQIRGDYFLTGDRARKDEEGYFWFESRNDDIIISSGYTIGPFEVEDALVKHPEVKECAVVASPDEIRGSIVKAYVVLQNHEKRSDELVKMLQNHVKTITAPYKYPREIEFVESLPKTASAKIRRVELRKREEQLKANKKA

Atome Classification :

(23 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

COA_A_4(3GPC)
ACS2A_HUMAN
[Raw transfer]



APC_A_7(3DAY)
ACS2A_HUMAN
[Raw transfer]



AMP_A_3(3EQ6)
ACS2A_HUMAN
[Raw transfer]



AMP_B_5(3EQ6)
ACS2A_HUMAN
[Raw transfer]



COA_B_6(3GPC)
ACS2A_HUMAN
[Raw transfer]



GOL_B_23(3ETC)
?
[Raw transfer]



GOL_B_22(3ETC)
?
[Raw transfer]



PGE_B_17(3ETC)
?
[Raw transfer]



1PE_A_5(3ETC)
?
[Raw transfer]



FOR_B_15(3ETC)
?
[Raw transfer]



1PE_A_6(3ETC)
?
[Raw transfer]
11 PsiBlast_PDB 90.2630% 0 - C- -2P2Q - ACSA_SALTY -
9 PsiBlast_PDB 90.2630% 0 - C- -2P2B - ACSA_SALTY -
16 PsiBlast_PDB 88.7429% 0 - C- -1PG4 - ACSA_SALTY -
15 PsiBlast_PDB 88.7429% 0 - C- -1PG3 - ACSA_SALTY -
13 PsiBlast_PDB 88.7429% 0 - C- -2P2J - ACSA_SALTY -
50 HHSearch 83.5829% 0 - C- -1PG4 - ACSA_SALTY -
51 HHSearch 76.7037% -15 - C4 -3ETC 3.2 ?
21 PsiBlast_CBE 76.5436% 14 - C4 -3ETC 4.0 ?
25 PsiBlast_CBE 75.0434% 23 - C4 -3EQ6 5.5 ACS2A_HUMAN
23 PsiBlast_CBE 74.7634% 23 - C4 -2WD9 - ACS2A_HUMAN -
5 PsiBlast_PDB 74.6634% 24 - C4 -2VZE - ACS2A_HUMAN -
6 PsiBlast_PDB 74.4434% 26 - C4 -3EQ6 5.8 ACS2A_HUMAN
1 PsiBlast_PDB 74.3034% 24 - C4 -2WD9 - ACS2A_HUMAN -
2 PsiBlast_PDB 74.2834% 22 - C4 -3B7W - ACS2A_HUMAN -
27 PsiBlast_CBE 74.2334% 23 - C4 -2VZE - ACS2A_HUMAN -
22 PsiBlast_CBE 74.1634% 24 - C4 -2WD9 - ACS2A_HUMAN -
3 PsiBlast_PDB 74.0234% 24 - C4 -3C5E - ACS2A_HUMAN -
10 PsiBlast_PDB 73.6730% -7 - C4 -2P2F - ACSA_SALTY -
26 PsiBlast_CBE 73.4834% 23 - C4 -2VZE - ACS2A_HUMAN -
14 PsiBlast_PDB 73.4729% -8 - C4 -2P2M - ACSA_SALTY -
4 PsiBlast_PDB 73.1834% 25 - C4 -3DAY 8.9 ACS2A_HUMAN
7 PsiBlast_PDB 73.1234% 21 - C4 -3GPC 5.3 ACS2A_HUMAN
24 PsiBlast_CBE 72.7634% 20 - C4 -3GPC 6.0 ACS2A_HUMAN