@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : bsu29590: (2016-07-18 )
MIYLDNSSTTKPYDEVLNVYEQTSSRYFGNPSSLHRYGAETEQLLQAAKNQIKRSLGLKKYDIVFTSGATEANNAALKGAALSKIKTGKHIIATSIEHPSVTESLEQLKELFGFDITYLSVNEDGFVSIEDLKAAIRPDTVLVSMMHVNNEVGSVQPIEAAGEVLKEHSNILFHVDYVQGIYKVPLAIEKAGIDLCSISGHKFHGLKGTGALIVKEGTRLIPLITGGSQQKGIRAGTEHTAGAVSLAKAINLASADFDTRLDTMTAVKELFMNRLSEIEGVVINTPQMNSAPHIINFSVPGIKAEVLLHMLEEQDIFVSTTSACSAKEHKPSKVLLEMGKGEQIAGSSIRISLNYSQTSDVAEPFMNALRPGIKKLREMMR

Atome Classification :

(25 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

PMP_A_5(4R5F)
ISCS2_ARCFU
[Raw transfer]



PMP_A_5(4HVK)
ISCS2_ARCFU
[Raw transfer]



PMP_A_5(4HVK)
ISCS2_ARCFU
[Raw transfer]



PLP_D_4(1ECX)
?
[Raw transfer]



PLP_C_3(1ECX)
?
[Raw transfer]



PLP_B_8(4EB7)
ISCS2_ARCFU
[Raw transfer]



PLP_A_3(3VAX)
?
[Raw transfer]



PLP_A_6(1EG5)
?
[Raw transfer]



PLP_A_3(3VAX)
?
[Raw transfer]



PLP_B_6(3LVJ)
ISCS_ECO57
[Raw transfer]



PLP_A_6(1EG5)
?
[Raw transfer]



PLP_B_4(3VAX)
?
[Raw transfer]



PLP_B_9(4EB5)
ISCS2_ARCFU
[Raw transfer]



PLP_A_4(4EB7)
ISCS2_ARCFU
[Raw transfer]



PLP_A_3(3A9X)
SCLY_RAT
[Raw transfer]



PLP_A_3(3A9Z)
SCLY_RAT
[Raw transfer]



PLP_A_5(4EB5)
ISCS2_ARCFU
[Raw transfer]



PLP_A_3(3A9Z)
SCLY_RAT
[Raw transfer]



PLP_A_3(3LVK)
ISCS_ECO57
[Raw transfer]



CYS_F_6(1ECX)
?
[Raw transfer]



LPG_C_3(1I29)
SUFS_ECOLI
[Raw transfer]



CYS_E_5(1ECX)
?
[Raw transfer]
4 PsiBlast_PDB 77.0235% -44 - C1 -1EG5 3.8 ?
3 PsiBlast_PDB 74.9636% -48 - C1 -1ECX 3.9 ?
22 PsiBlast_CBE 74.3336% -47 - C1 -1ECX 3.9 ?
2 PsiBlast_PDB 74.1038% 26 - C1 -3LVK 3.4 ISCS_ECO57
21 PsiBlast_CBE 73.9238% 26 - C1 -3LVJ 3.8 ISCS_ECO57
64 HHSearch 73.2033% 9 - C1 -4IXO - ? -
56 HHSearch 72.8936% 12 - C1 -1EG5 3.8 ?
1 PsiBlast_PDB 72.2738% 27 - C1 -3LVJ - ISCS_ECO57 -
6 PsiBlast_PDB 71.5732% 6 - C1 -4EB5 3.4 ISCS2_ARCFU
68 HHSearch 71.2731% 14 - C1 -3A9Z 3.8 SCLY_RAT
7 PsiBlast_PDB 71.1632% 4 - C1 -4EB7 3.1 ISCS2_ARCFU
58 HHSearch 71.0032% 0 * C1 *4HVK 3.6 ISCS2_ARCFU
25 PsiBlast_CBE 70.9234% -10 - C1 -3VAX 4.0 ?
61 HHSearch 70.8731% 6 - C1 -4ISY - ISCSL_MYCTU -
15 PsiBlast_PDB 70.6531% 8 - C1 -4IXO - ? -
9 PsiBlast_PDB 70.2334% -11 - C1 -3VAX 4.0 ?
5 PsiBlast_PDB 70.2232% 9 - C1 -4R5F 4.3 ISCS2_ARCFU
23 PsiBlast_CBE 70.1532% 10 - C1 -4EB7 3.5 ISCS2_ARCFU
47 Fugue 69.8931% 6 - C1 -4ISY - ISCSL_MYCTU -
46 Fugue 69.7035% 30 - C1 -1ECX - ? -
24 PsiBlast_CBE 69.6432% 9 - C1 -4EB5 3.2 ISCS2_ARCFU
8 PsiBlast_PDB 69.6132% 8 - C1 -4HVK 3.6 ISCS2_ARCFU
62 HHSearch 69.5534% -6 - C1 -3VAX 4.0 ?
12 PsiBlast_PDB 69.4130% 3 - C1 -3A9Z 3.8 SCLY_RAT
11 PsiBlast_PDB 67.3130% 9 - C1 -3A9X 3.4 SCLY_RAT