@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : bsu29680: (2016-07-18 )
MNLKALPAIEGDHNLKNYEETYRHFDWAEAEKHFSWHETGKLNAAYEAIDRHAESFRKNKVALYYKDAKRDEKYTFKEMKEESNRAGNVLRRYGNVEKGDRVFIFMPRSPELYFIMLGAIKIGAIAGPLFEAFMEGAVKDRLENSEAKVVVTTPELLERIPVDKLPHLQHVFVVGGEAESGTNIINYDEAAKQESTRLDIEWMDKKDGFLLHYTSGSTGTPKGVLHVHEAMIQQYQTGKWVLDLKEEDIYWCTADPGWVTGTVYGIFAPWLNGATNVIVGGRFSPESWYGTIEQLGVNVWYSAPTAFRMLMGAGDEMAAKYDLTSLRHVLSVGEPLNPEVIRWGHKVFNKRIHDTWWMTETGSQLICNYPCMDIKPGSMGKPIPGVEAAIVDNQGNELPPYRMGNLAIKKGWPSMMHTIWNNPEKYESYFMPGGWYVSGDSAYMDEEGYFWFQGRVDDVIMTSGERVGPFEVESKLVEHPAIAEAGVIGKPDPVRGEIIKAFIALREGFEPSDKLKEEIRLFVKQGLAAHAAPREIEFKDKLPKTRSGKIMRRVLKAWELNLPAGDLSTMED

Atome Classification :

(23 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

ATP_A_7(3C5E)
ACS2A_HUMAN
[Raw transfer]



ATP_A_7(3C5E)
ACS2A_HUMAN
[Raw transfer]



APC_A_7(3DAY)
ACS2A_HUMAN
[Raw transfer]



AMP_A_3(3EQ6)
ACS2A_HUMAN
[Raw transfer]



AMP_B_5(3EQ6)
ACS2A_HUMAN
[Raw transfer]



COA_A_4(3GPC)
ACS2A_HUMAN
[Raw transfer]



COA_B_6(3GPC)
ACS2A_HUMAN
[Raw transfer]



GOL_B_23(3ETC)
?
[Raw transfer]



GOL_B_22(3ETC)
?
[Raw transfer]



GOL_A_12(3ETC)
?
[Raw transfer]



GOL_A_12(3ETC)
?
[Raw transfer]
31 HHSearch 96.0738% 0 - C- -1PG4 - ACSA_SALTY -
39 HHSearch 82.6533% -21 - C3 -4WV3 - ? -
21 PsiBlast_CBE 81.9434% -11 - C3 -5IFI - ? -
3 PsiBlast_PDB 78.9731% 11 - C3 -3DAY 5.9 ACS2A_HUMAN
55 Fugue 78.9035% 31 - C3 -1PG4 - ACSA_SALTY -
23 PsiBlast_CBE 78.5531% 11 - C3 -3EQ6 4.5 ACS2A_HUMAN
2 PsiBlast_PDB 78.2631% 10 - C3 -3C5E 6.7 ACS2A_HUMAN
25 PsiBlast_CBE 78.1131% 11 - C3 -2VZE - ACS2A_HUMAN -
5 PsiBlast_PDB 78.0931% 10 - C3 -3EQ6 2.8 ACS2A_HUMAN
27 PsiBlast_CBE 77.9231% 9 - C3 -2WD9 - ACS2A_HUMAN -
7 PsiBlast_PDB 77.8231% 11 - C3 -2WD9 - ACS2A_HUMAN -
4 PsiBlast_PDB 77.6331% 9 - C3 -2VZE - ACS2A_HUMAN -
26 PsiBlast_CBE 77.6031% 12 - C3 -2WD9 - ACS2A_HUMAN -
35 HHSearch 77.3331% 14 - C3 -3C5E 6.7 ACS2A_HUMAN
1 PsiBlast_PDB 77.1231% 10 - C3 -3B7W - ACS2A_HUMAN -
24 PsiBlast_CBE 77.0231% 12 - C3 -2VZE - ACS2A_HUMAN -
29 PsiBlast_CBE 76.8332% 10 - C3 -4WV3 - ? -
22 PsiBlast_CBE 76.6731% 7 - C3 -3GPC 3.2 ACS2A_HUMAN
9 PsiBlast_PDB 76.6232% 10 - C3 -4WV3 - ? -
28 PsiBlast_CBE 75.3632% -8 - C3 -3ETC 2.4 ?
8 PsiBlast_PDB 75.1332% -11 - C3 -3ETC 1.5 ?
6 PsiBlast_PDB 75.1031% 11 - C3 -3GPC 1.6 ACS2A_HUMAN
34 HHSearch 72.6931% -5 - C3 -3ETC 1.5 ?