@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : bsu29750: (2016-07-18 )
MSNTELELLRQKADELNLQILKLINERGNVVKEIGKAKEAQGVNRFDPVRERTMLNNIIENNDGPFENSTIQHIFKEIFKAGLELQEEDHSKALLVSRKKKPEDTIVDIKGEKIGDGQQRFIVGPCAVESYEQVAEVAAAAKKQGIKILRGGAFKPRTSPYDFQGLGVEGLQILKRVADEFDLAVISEIVTPAHIEEALDYIDVIQIGARNMQNFELLKAAGAVKKPVLLKRGLAATISEFINAAEYIMSQGNDQIILCERGIRTYETATRNTLDISAVPILKQETHLPVFVDVTHSTGRRDLLLPTAKAALAIGADGVMAEVHPDPSVALSDSAQQMAIPEFEKWLNELKPMVKVNA

Atome Classification :

(56 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

PEP_C_11(1VS1)
?
[Raw transfer]




H4P_B_6(1PCW)
KDSA_AQUAE
[Raw transfer]




PEP_A_4(3TFC)
?
[Raw transfer]




PEP_B_7(3TFC)
?
[Raw transfer]




PEP_B_10(1VS1)
?
[Raw transfer]




PEP_D_12(1VS1)
?
[Raw transfer]




PEP_A_9(1VS1)
?
[Raw transfer]




PEP_A_9(1VS1)
?
[Raw transfer]




PEP_A_7(1LRQ)
KDSA_AQUAE
[Raw transfer]




PEP_B_7(1ZCO)
?
[Raw transfer]




PEZ_B_8(1PCK)
KDSA_AQUAE
[Raw transfer]




PEP_A_6(1ZCO)
?
[Raw transfer]




PEZ_A_7(1PCK)
KDSA_AQUAE
[Raw transfer]




PEP_B_8(3E0I)
KDSA_AQUAE
[Raw transfer]




PEP_B_7(1FWT)
KDSA_AQUAE
[Raw transfer]




PEP_A_7(3E0I)
KDSA_AQUAE
[Raw transfer]




PEP_B_6(2A2I)
KDSA_AQUAE
[Raw transfer]




PEP_B_8(1ZHA)
KDSA_AQUAE
[Raw transfer]




2PG_A_7(1PE1)
KDSA_AQUAE
[Raw transfer]




PEP_A_6(1T8X)
KDSA_AQUAE
[Raw transfer]




PEP_B_8(1FWS)
KDSA_AQUAE
[Raw transfer]




PEP_A_7(1T96)
KDSA_AQUAE
[Raw transfer]




PEP_A_7(1FWS)
KDSA_AQUAE
[Raw transfer]




PEP_B_8(1JCY)
KDSA_AQUAE
[Raw transfer]




PEP_A_7(2A21)
KDSA_AQUAE
[Raw transfer]




PEP_A_6(1FWT)
KDSA_AQUAE
[Raw transfer]




PEP_B_8(1T96)
KDSA_AQUAE
[Raw transfer]




PEP_A_6(1FWW)
KDSA_AQUAE
[Raw transfer]




PEP_B_7(1FWW)
KDSA_AQUAE
[Raw transfer]




PEP_B_7(1T8X)
KDSA_AQUAE
[Raw transfer]




PEP_A_7(1ZHA)
KDSA_AQUAE
[Raw transfer]




PEP_B_8(2A21)
KDSA_AQUAE
[Raw transfer]




PEP_A_7(1JCY)
KDSA_AQUAE
[Raw transfer]




PEP_A_5(2A2I)
KDSA_AQUAE
[Raw transfer]




PEP_I_9(1FWN)
KDSA_AQUAE
[Raw transfer]




PEP_K_11(1FWN)
KDSA_AQUAE
[Raw transfer]




PEP_G_7(1FXQ)
KDSA_AQUAE
[Raw transfer]




PEP_E_5(1FXQ)
KDSA_AQUAE
[Raw transfer]




E4P_A_8(1RZM)
AROF_THEMA
[Raw transfer]




E4P_B_9(1RZM)
AROF_THEMA
[Raw transfer]




1 PsiBlast_PDB 94.6476% -98 - C2 -3NVT - ? -
2 PsiBlast_PDB 94.6276%-103 - C2 -3TFC 4.8 ?
124 Fugue 94.4775% -98 - C2 -3NVT - ? -
21 PsiBlast_CBE 94.2376%-107 - C2 -3TFC 4.9 ?
22 PsiBlast_CBE 93.4176%-104 - C2 -3NVT - ? -
104 HHSearch 88.0172% -68 - C2 -3NVT - ? -
8 PsiBlast_PDB 80.7555%-102 - C2 -4C1K - ? -
34 PsiBlast_CBE 79.7155%-103 - C2 -1ZCO 4.4 ?
35 PsiBlast_CBE 79.1955% -96 - C2 -4C1K - ? -
38 PsiBlast_CBE 79.1355% -99 - C2 -4C1K - ? -
40 PsiBlast_CBE 79.0754% -97 - C2 -4C1L - ? -
29 PsiBlast_CBE 79.0553%-102 - C2 -3PG9 - AROF_THEMA -
39 PsiBlast_CBE 78.8455%-102 - C2 -4C1K - ? -
37 PsiBlast_CBE 78.7755% -97 - C2 -4C1K - ? -
26 PsiBlast_CBE 78.6553%-102 - C2 -3PG9 - AROF_THEMA -
36 PsiBlast_CBE 78.6455%-100 - C2 -4C1K - ? -
9 PsiBlast_PDB 78.6454% -95 - C2 -4C1L - ? -
33 PsiBlast_CBE 78.6353%-103 - C2 -1RZM 3.2 AROF_THEMA
3 PsiBlast_PDB 78.6356%-107 - C2 -4GRS - AROF_THEMA -
32 PsiBlast_CBE 78.3953% -99 - C2 -3PG9 - AROF_THEMA -
41 PsiBlast_CBE 78.2555%-100 - C2 -1VS1 5.3 ?
4 PsiBlast_PDB 78.1853%-100 - C2 -1RZM 2.3 AROF_THEMA
42 PsiBlast_CBE 77.4855% -99 - C2 -1VS1 4.5 ?
43 PsiBlast_CBE 77.3655%-102 - C2 -1VS1 5.9 ?
10 PsiBlast_PDB 77.3355% -98 - C2 -1VS1 5.2 ?
7 PsiBlast_PDB 77.2455%-100 - C2 -1ZCO 3.3 ?
106 HHSearch 71.8251% -62 - C2 -1VS1 4.1 ?
47 PsiBlast_CBE 52.3231% 6 - C2 -3E0I 3.3 KDSA_AQUAE
13 PsiBlast_PDB 52.1131% 8 - C2 -1FWT 3.5 KDSA_AQUAE
76 PsiBlast_CBE 52.0431% 12 - C2 -1T8X 3.2 KDSA_AQUAE
14 PsiBlast_PDB 51.9231% 9 - C2 -1FWW 3.4 KDSA_AQUAE
51 PsiBlast_CBE 51.5431% 9 - C2 -2A21 3.4 KDSA_AQUAE
49 PsiBlast_CBE 51.4831% 7 - C2 -2A2I 3.2 KDSA_AQUAE
58 PsiBlast_CBE 51.3531% 13 - C2 -1JCY 3.4 KDSA_AQUAE
65 PsiBlast_CBE 51.3131% 13 - C2 -1FWT 3.2 KDSA_AQUAE
77 PsiBlast_CBE 51.3031% 8 - C2 -1T8X 3.5 KDSA_AQUAE
53 PsiBlast_CBE 51.1631% 5 - C2 -1PE1 3.5 KDSA_AQUAE
61 PsiBlast_CBE 51.1431% 12 - C2 -1FXQ 3.0 KDSA_AQUAE
17 PsiBlast_PDB 51.0631% 12 - C2 -1FXQ 3.3 KDSA_AQUAE
46 PsiBlast_CBE 50.9931% 10 - C2 -3E0I 3.6 KDSA_AQUAE
20 PsiBlast_PDB 50.9431% 9 - C2 -1JCY 3.2 KDSA_AQUAE
64 PsiBlast_CBE 50.9131% 14 - C2 -1FWW 3.4 KDSA_AQUAE
74 PsiBlast_CBE 50.7831% 13 - C2 -1T96 3.2 KDSA_AQUAE
57 PsiBlast_CBE 50.5931% 10 - C2 -1PCK 3.7 KDSA_AQUAE
48 PsiBlast_CBE 50.5731% 15 - C2 -2A2I 3.1 KDSA_AQUAE
11 PsiBlast_PDB 50.5731% 14 - C2 -1FWN 3.2 KDSA_AQUAE
66 PsiBlast_CBE 50.4831% 15 - C2 -1FWS 3.4 KDSA_AQUAE
12 PsiBlast_PDB 50.4231% 14 - C2 -1FWS 3.5 KDSA_AQUAE
54 PsiBlast_CBE 50.2231% 14 - C2 -1PCW 4.1 KDSA_AQUAE
50 PsiBlast_CBE 50.1231% 13 - C2 -2A21 3.3 KDSA_AQUAE
83 PsiBlast_CBE 49.9931% 9 - C2 -1LRQ 2.9 KDSA_AQUAE
71 PsiBlast_CBE 49.9531% 9 - C2 -1ZHA 3.4 KDSA_AQUAE
67 PsiBlast_CBE 49.7931% 16 - C2 -1FWN 3.0 KDSA_AQUAE
56 PsiBlast_CBE 49.7831% 12 - C2 -1PCK 3.5 KDSA_AQUAE
70 PsiBlast_CBE 49.6131% 15 - C2 -1ZHA 3.3 KDSA_AQUAE
75 PsiBlast_CBE 49.5631% 12 - C2 -1T96 3.5 KDSA_AQUAE