@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : bsu29880: (2016-07-18 )
MKQFRVTNEGDIQTTLRGLEVLSVPFLNKGVAFTEEERKELGLKGFLPPKVLTIDDQAKRAYEQYSAQPDDLSKNVYLTALHDRNETLFYRLLNDHLGEMLPIVYTPTVGTAIQRYSHEYRKPRGLYLSIDDPDGMKEAFKQYKDQSDTIDLIVATDAEGILGIGDWGVGGIAISIGKLAVYTAAAGIDPSRVLAVVLDAGTNQESLLNDPLYVGNQHSRVRGERYDQFIDDYVALARETFPNALLHWEDFGAKNARSILKRYKDKVCTFNDDIQGTGAVSLAAVLSCAKASKVPLRDHRVVIFGAGTAGIGIAEQLREALVREGLSEEESYKRFWCIDRNGLLTDDMDQLLDFQKPYARSADEVKDYQRNGDGGGIDLLEVVRQAKPTILIGTSTVSGAFTEEIVKEMASHVKRPAILPMSNPTTLSEAKPEDLIEWTEGRALITTGSPFPPVEYNGVTYHIGQANNALVFPGLGLGTIVTKSKLITDGMFEACARAIAGMVNVGVPGAPMLPKVEDLRTVSATVAVEVAKTAMKEGVATEEPEDIIQAVQDAMWYPVYKPIRAI

Atome Classification :

(25 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

NAI_I_9(1O0S)
MAOM_ASCSU
[Raw transfer]




NAD_E_5(1LLQ)
MAOM_ASCSU
[Raw transfer]




NAI_I_9(1O0S)
MAOM_ASCSU
[Raw transfer]




NAD_E_5(1LLQ)
MAOM_ASCSU
[Raw transfer]




NAI_J_10(1O0S)
MAOM_ASCSU
[Raw transfer]




NAD_F_6(1LLQ)
MAOM_ASCSU
[Raw transfer]




NAD_E_5(1LLQ)
MAOM_ASCSU
[Raw transfer]




31 HHSearch 80.2141% -56 - C2 -1GQ2 - MAOX_COLLI -
4 PsiBlast_PDB 78.3740% -55 - C2 -1GQ2 - MAOX_COLLI -
5 PsiBlast_PDB 77.1740% -49 - C2 -3WJA - MAOX_HUMAN -
3 PsiBlast_PDB 76.7540% -53 - C2 -2AW5 - MAOX_HUMAN -
30 HHSearch 76.2338% -50 - C2 -1PJ3 - MAOM_HUMAN -
23 PsiBlast_CBE 75.2437% -45 - C2 -1GZ3 - MAOM_HUMAN -
11 PsiBlast_PDB 75.1338% -45 - C2 -1GZ4 - MAOM_HUMAN -
25 PsiBlast_CBE 75.0837% -46 - C2 -1GZ3 - MAOM_HUMAN -
13 PsiBlast_PDB 75.0838% -45 - C2 -1PJ4 - MAOM_HUMAN -
6 PsiBlast_PDB 74.9937% -44 - C2 -1GZ3 - MAOM_HUMAN -
10 PsiBlast_PDB 74.9738% -48 - C2 -1QR6 - MAOM_HUMAN -
12 PsiBlast_PDB 74.7538% -46 - C2 -1DO8 - MAOM_HUMAN -
29 HHSearch 74.7140% -1 * C2 *1O0S 8.7 MAOM_ASCSU
24 PsiBlast_CBE 74.5637% -44 - C2 -1GZ3 - MAOM_HUMAN -
8 PsiBlast_PDB 74.5338% -46 - C2 -1EFL - MAOM_HUMAN -
15 PsiBlast_PDB 74.4538% -46 - C2 -1PJ3 - MAOM_HUMAN -
7 PsiBlast_PDB 74.2338% -48 - C2 -1EFK - MAOM_HUMAN -
9 PsiBlast_PDB 74.1738% -49 - C2 -1PJL - MAOM_HUMAN -
14 PsiBlast_PDB 74.1438% -46 - C2 -1PJ2 - MAOM_HUMAN -
22 PsiBlast_CBE 73.8440% -13 - C2 -1LLQ 8.6 MAOM_ASCSU
2 PsiBlast_PDB 73.6440% -14 - C2 -1O0S 9.6 MAOM_ASCSU
1 PsiBlast_PDB 73.6340% -14 - C2 -1LLQ 8.1 MAOM_ASCSU
49 Fugue 73.1839% 13 - C2 -1LLQ 7.3 MAOM_ASCSU
21 PsiBlast_CBE 73.1540% -15 - C2 -1O0S 9.2 MAOM_ASCSU
52 Fugue 48.2336% -35 - C2 -1LLQ 8.0 MAOM_ASCSU