@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : bsu30380: (2016-07-20 )
MVILEANKIRKSYGNKLNKQEVLKGIDIHIEKGEFVSIMGASGSGKTTLLNVLSSIDQVSHGTIHINGNDMTAMKEKQLAEFRKQHLGFIFQDYNLLDTLTVKENILLPLSITKLSKKEANRKFEEVAKELGIYELRDKYPNEISGGQKQRTSAGRAFIHDPSIIFADEPTGALDSKSASDLLNKLSQLNQKRNATIIMVTHDPVAASYCGRVIFIKDGQMYTQLNKGGQDRQTFFQDIMKTQGVLGGVQHEH

Atome Classification :

(30 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

ANP_B_7(2ONJ)
Y1866_STAAM
[Raw transfer]



ANP_A_8(2ONJ)
Y1866_STAAM
[Raw transfer]



ATP_B_6(3FVQ)
FBPC_NEIG1
[Raw transfer]



ATP_A_3(3FVQ)
FBPC_NEIG1
[Raw transfer]



ATP_A_5(1B0U)
HISP_SALTY
[Raw transfer]



ATP_A_3(3FVQ)
FBPC_NEIG1
[Raw transfer]



ADP_A_3(4YER)
?
[Raw transfer]



ADP_A_5(2HYD)
Y1866_STAAM
[Raw transfer]



ADP_B_6(2HYD)
Y1866_STAAM
[Raw transfer]



LMT_B_4(4MKI)
ECFA2_CALS4
[Raw transfer]



LMT_A_7(4MKI)
ECFA2_CALS4
[Raw transfer]
5 PsiBlast_PDB 84.0137% -98 - C1 -2PCL - LOLD_AQUAE -
23 PsiBlast_CBE 83.3837%-101 - C1 -2PCJ - LOLD_AQUAE -
4 PsiBlast_PDB 81.5537% -97 - C1 -2PCJ - LOLD_AQUAE -
81 HHSearch 81.4729%-114 - C1 -3TUI - METN_ECOLI -
64 Fugue 80.4528%-103 - C1 -3TUZ - METN_ECOLI -
8 PsiBlast_PDB 80.0430%-122 - C1 -3TUZ - METN_ECOLI -
7 PsiBlast_PDB 78.9830%-117 - C1 -3TUI - METN_ECOLI -
25 PsiBlast_CBE 78.3335% -53 - C1 -4YMU - ? -
13 PsiBlast_PDB 77.6835% -54 - C1 -4YMV - ? -
12 PsiBlast_PDB 77.4035% -49 - C1 -4YMU - ? -
77 HHSearch 77.3932%-104 - C1 -2IT1 - ? -
24 PsiBlast_CBE 77.1235% -54 - C1 -4YMV - ? -
11 PsiBlast_PDB 77.0135% -49 - C1 -4YMT - ? -
10 PsiBlast_PDB 76.5135% -50 - C1 -4YMS - ? -
33 PsiBlast_CBE 76.4936% -70 - C1 -2OLK - ? -
14 PsiBlast_PDB 76.2935% -52 - C1 -4YMW - ? -
31 PsiBlast_CBE 75.8136% -67 - C1 -2OLK - ? -
83 HHSearch 74.9129%-121 - C1 -3RLF - MALK_ECOLI -
9 PsiBlast_PDB 74.8931%-122 - C1 -3TUJ - METN_ECOLI -
32 PsiBlast_CBE 74.5436% -67 - C1 -2OLK - ? -
82 HHSearch 71.4031%-107 - C1 -3FVQ 7.2 FBPC_NEIG1
60 PsiBlast_CBE 68.8832%-107 - C1 -3FVQ 7.5 FBPC_NEIG1
61 PsiBlast_CBE 68.2632%-107 - C1 -3FVQ 7.2 FBPC_NEIG1
54 PsiBlast_CBE 64.8634% -20 - C1 -1B0U 6.1 HISP_SALTY
59 PsiBlast_CBE 54.5334% -36 - C1 -2HYD 4.1 Y1866_STAAM
58 PsiBlast_CBE 54.3034% -36 - C1 -2HYD 3.7 Y1866_STAAM
56 PsiBlast_CBE 51.3134% -39 - C1 -2ONJ 7.3 Y1866_STAAM
57 PsiBlast_CBE 50.0434% -39 - C1 -2ONJ 7.1 Y1866_STAAM
53 PsiBlast_CBE 45.8939% 1 - C1 -4MKI 3.9 ECFA2_CALS4
52 PsiBlast_CBE 42.2939% -3 - C1 -4MKI 2.0 ECFA2_CALS4