@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : bsu30550: (2016-07-20 )
MSKNRRLFTSESVTEGHPDKICDQISDSILDEILKKDPNARVACETSVTTGLVLVSGEITTSTYVDIPKTVRQTIKEIGYTRAKYGFDAETCAVLTSIDEQSADIAMGVDQALEAREGTMSDEEIEAIGAGDQGLMFGYACNETKELMPLPISLAHKLARRLSEVRKEDILPYLRPDGKTQVTVEYDENNKPVRIDAIVISTQHHPEITLEQIQRNIKEHVINPVVPEELIDEETKYFINPTGRFVIGGPQGDAGLTGRKIIVDTYGGYARHGGGAFSGKDATKVDRSAAYAARYVAKNIVAAELADSCEVQLAYAIGVAQPVSISINTFGSGKASEEKLIEVVRNNFDLRPAGIIKMLDLRRPIYKQTAAYGHFGRHDVDLPWERTDKAEQLRKEALGE

Atome Classification :

(33 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

UNL_A_6(3S82)
METK_MYCA1
[Raw transfer]




UNL_A_5(3S82)
METK_MYCA1
[Raw transfer]




POP_A_7(1MXA)
?
[Raw transfer]




UNL_A_5(3S82)
METK_MYCA1
[Raw transfer]




ABP_A_7(1MXC)
METK_ECOLI
[Raw transfer]




ADP_A_7(1MXB)
METK_ECOLI
[Raw transfer]




GOL_A_6(3RV2)
METK_MYCMM
[Raw transfer]




GOL_B_11(3RV2)
METK_MYCMM
[Raw transfer]




ATP_B_9(1O9T)
METK1_RAT
[Raw transfer]




POP_A_7(1MXA)
METK_ECOLI
[Raw transfer]




ADP_B_9(1O92)
METK1_RAT
[Raw transfer]




ATP_B_9(1O93)
METK1_RAT
[Raw transfer]




POP_A_7(1MXA)
?
[Raw transfer]




59 HHSearch 83.9765% -63 - C6 -1P7L - METK_ECOLI -
2 PsiBlast_PDB 83.4163% -62 - C6 -1P7L - METK_ECOLI -
22 PsiBlast_CBE 83.1663% -63 - C6 -1RG9 - METK_ECOLI -
23 PsiBlast_CBE 82.8963% -62 - C6 -1RG9 - METK_ECOLI -
21 PsiBlast_CBE 82.8863% -63 - C6 -1RG9 - METK_ECOLI -
3 PsiBlast_PDB 82.7363% -62 - C6 -1RG9 - METK_ECOLI -
26 PsiBlast_CBE 82.5863% -62 - C6 -1P7L - METK_ECOLI -
25 PsiBlast_CBE 82.4363% -61 - C6 -1P7L - METK_ECOLI -
7 PsiBlast_PDB 82.3163% -67 - C6 -1XRA - METK_ECOLI -
8 PsiBlast_PDB 82.1463% -67 - C6 -1XRC - METK_ECOLI -
24 PsiBlast_CBE 82.1363% -63 - C6 -1P7L - METK_ECOLI -
12 PsiBlast_PDB 81.5762% -70 - C6 -1XRB - METK_ECOLI -
1 PsiBlast_PDB 80.0363% -70 - C6 -1FUG - METK_ECOLI -
13 PsiBlast_PDB 79.6659% -65 - C6 -3IML - METK_BURPS -
53 HHSearch 79.3660% -65 - C6 -3IML - METK_BURPS -
14 PsiBlast_PDB 78.5559% -19 - C6 -2OBV - METK1_HUMAN -
55 HHSearch 77.8659% -11 - C6 -5A1I - ? -
20 PsiBlast_PDB 77.4158% -15 - C6 -2P02 - METK2_HUMAN -
35 PsiBlast_CBE 77.1458% -13 - C6 -5A1I - ? -
36 PsiBlast_CBE 77.0558% -16 - C6 -5A1G - ? -
19 PsiBlast_PDB 76.6959% -20 - C6 -1O9T 4.3 METK1_RAT
32 PsiBlast_CBE 76.5459% -21 - C6 -1O93 4.0 METK1_RAT
33 PsiBlast_CBE 76.2059% -22 - C6 -1O92 3.0 METK1_RAT
56 HHSearch 74.4861% 0 - C6 -3S82 Error METK_MYCA1
27 PsiBlast_CBE 74.3560% 3 - C6 -3S82 Error METK_MYCA1
9 PsiBlast_PDB 74.2360% 2 - C6 -3S82 Error METK_MYCA1
29 PsiBlast_CBE 73.0759% -0 - C6 -3RV2 3.8 METK_MYCMM
11 PsiBlast_PDB 72.9859% -0 - C6 -3RV2 3.7 METK_MYCMM
6 PsiBlast_PDB 72.2963% -70 - C6 -1MXC 3.7 METK_ECOLI
4 PsiBlast_PDB 71.7863% -66 - C6 -1MXA 3.0 METK_ECOLI
5 PsiBlast_PDB 71.1563% -68 - C6 -1MXB 4.0 METK_ECOLI
68 Fugue 53.2871% -96 - C6 -1MXA Error ?
70 Fugue 50.9254%-141 - C6 -1MXA Error ?