@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : bsu30920: (2016-07-21 )
MCPLMAENHEVIEEGNSSELPLSAEDAKKLTELAENVLQGWDVQAEKIDVIQGNQMALVWKVHTDSGAVCLKRIHRPEKKALFSIFAQDYLAKKGMNVPGILPNKKGSLYSKHGSFLFVVYDWIEGRPFELTVKQDLEFIMKGLADFHTASVGYQPPNGVPIFTKLGRWPNHYTKRCKQMETWKLMAEAEKEDPFSQLYLQEIDGFIEDGLRIKDRLLQSTYVPWTEQLKKSPNLCHQDYGTGNTLLGENEQIWVIDLDTVSFDLPIRDLRKMIIPLLDTTGVWDDETFNVMLNAYESRAPLTEEQKQVMFIDMLFPYELYDVIREKYVRKSALPKEELESAFEYERIKANALRQLI

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

UNL_A_9(2Q83)
COTI_BACSU
[Raw transfer]




ADN_A_5(2Q83)
COTI_BACSU
[Raw transfer]




13 HHSearch 99.77100%-119 - C1 -2Q83 4.5 COTI_BACSU
1 PsiBlast_PDB 99.1497%-119 - C1 -2Q83 4.3 COTI_BACSU
14 HHSearch 51.7017% 2 - C1 -4PDY - ? -
36 Fugue 49.3315% -27 - C1 -2PPQ - KHSE_AGRFC -
38 Fugue 48.6211% -90 - C1 -1ZYL - SRKA_ECOLI -
15 HHSearch 48.1319% -26 - C1 -2PPQ - KHSE_AGRFC -
44 Fugue 40.8620% 4 - C1 -4OCV - ? -
2 PsiBlast_PDB 39.9620% 4 - C1 -4PDY - ? -
18 HHSearch 38.3014% -1 - C1 -1ZYL - SRKA_ECOLI -
16 HHSearch 36.5515% -1 - C1 -4OCV - ? -
34 HHSearch 36.0212% -48 - C1 -3W0O - KHYB_ECOLX -
37 Fugue 35.7713% 10 - C1 -3I1A - ? -
20 HHSearch 34.5915% -3 - C1 -5FTG - ? -
25 HHSearch 34.3414% 14 * C1 *4DCA - ? -
27 HHSearch 33.5518% 14 - C1 -3F7W - ? -
26 HHSearch 33.3114% -41 - C1 -4U98 - MAK_MYCVP -
17 HHSearch 32.9017% -4 - C1 -3I1A - ? -
39 Fugue 32.5314% -2 - C1 -1NW1 - CKA2_CAEEL -
22 HHSearch 32.0513% 21 - C1 -4DA5 - CHKA_HUMAN -
28 HHSearch 30.1513% 18 - C1 -3TM0 - KKA3_ENTFL -