@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : bsu31050: (2016-07-21 )
MTLNMKVESMQKFHTFEIPTVIKHGIGAIKHTGEEVAALGVSKALLVTDPGIYKAGVADPVIESLKEAGIEVVLFNKVEPNPPVRLVNEGSELYKKENCNGLVAVGGGSSMDTAKAIGVEATHEGSVLDYEAADGKKPLENRIPPLTTIPTTAGTGSEVTQWAVITDEEREFKFNTGGPLIAAHLTIIDPELHVSMPPHVTAMTGIDALAHAIECYTMKFAQPITDAVALMAIEYAAHYIKRAFADGEDLEARYGMAQAAMLAGLSYGSESAGAAHAMSQTLGGIIPVAHGQCVAAMMGPVMEYNWKGYPEKFARIAKAFGIDTSKMTTEEAAKASVNWMYDLVEDLEVPTLEEQGVSPDMIERLSKEAMKDPQTFGNPRDLNEKAYNWIYKRCFNLTPKTV

Atome Classification :

(23 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

NAP_A_7(1VHD)
?
[Raw transfer]




NAP_A_5(1O2D)
?
[Raw transfer]




NAD_A_4(2BI4)
FUCO_ECOLI
[Raw transfer]




NAP_A_5(1O2D)
?
[Raw transfer]




APR_A_7(1RRM)
FUCO_ECOLI
[Raw transfer]




62 HHSearch 94.7339% -80 - C4 -3BFJ - DHAT_KLEPN -
60 HHSearch 90.3936% -81 - C4 -3OX4 - ADH2_ZYMMO -
59 HHSearch 89.8333% -85 - C4 -5BR4 - FUCO_ECOLI -
46 PsiBlast_CBE 87.5435% -92 - C4 -2BL4 - FUCO_ECOLI -
5 PsiBlast_PDB 87.0735% -95 - C4 -2BI4 7.4 FUCO_ECOLI
21 PsiBlast_CBE 86.0339% -11 - C4 -3BFJ - DHAT_KLEPN -
6 PsiBlast_PDB 85.9035% -90 - C4 -2BL4 - FUCO_ECOLI -
8 PsiBlast_PDB 85.5334% -85 - C4 -1RRM 7.7 FUCO_ECOLI
36 PsiBlast_CBE 85.4039% -12 - C4 -3BFJ - DHAT_KLEPN -
7 PsiBlast_PDB 85.3435% -91 - C4 -5BR4 - FUCO_ECOLI -
47 PsiBlast_CBE 84.9935% -92 - C4 -2BI4 - FUCO_ECOLI -
48 PsiBlast_CBE 84.9835% -91 - C4 -5BR4 - FUCO_ECOLI -
1 PsiBlast_PDB 84.8139% -11 - C4 -3BFJ - DHAT_KLEPN -
38 PsiBlast_CBE 84.7939% -10 - C4 -3BFJ - DHAT_KLEPN -
37 PsiBlast_CBE 84.6039% -11 - C4 -3BFJ - DHAT_KLEPN -
39 PsiBlast_CBE 84.4839% -11 - C4 -3BFJ - DHAT_KLEPN -
40 PsiBlast_CBE 84.4637% -33 - C4 -3OX4 - ADH2_ZYMMO -
35 PsiBlast_CBE 84.1839% -11 - C4 -3BFJ - DHAT_KLEPN -
45 PsiBlast_CBE 83.4637% -30 - C4 -3OWO - ADH2_ZYMMO -
42 PsiBlast_CBE 83.3537% -32 - C4 -3OX4 - ADH2_ZYMMO -
65 HHSearch 65.3230% 9 - C4 -1O2D 9.5 ?
10 PsiBlast_PDB 58.3830% -23 - C4 -1O2D 9.2 ?
11 PsiBlast_PDB 58.1730% -22 - C4 -1VHD 8.9 ?