@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : bsu31290: (2016-07-22 )
MKKAWWKEAVVYQIYPRSFKDSNGDGIGDIQGIRTKLSYIKELGADVIWICPLYDSPNADNGYDIRDYQNILSEFGTMEDFDELLGDIHDLDMKLIMDLVVNHTSDEHPWFIESRSSIHSEKRDWYIWKDGKNGKTPNNWESIFGGPAWEYDQKTSQYYLHLFDKKQPDLNWENEKVRNAVYDMINWWLDKGIDGFRVDAITHIKKKEGFPDMPNPKGLDYVPSFPYHMNADGIMDLLTELKENTFSRYPIMTVGEANGVAAKEAADWAGEKNGIFSMIFQFEHLGLWDVEINESIDIVAFKRILTDWQDSLEGIGWNALFMENHDQPRSVSVWGDDGVYLKESAKALSAVYFLMKGTPFIYQGQELGMTNVAFPSIEDYDDVALKRLYETKTAKGTSHEDVMKIVWKKGRDNSRTPMQWNAGPYAGFSEAKPWIGINENYKWLNAEAQKNDKTSVYHFYKSLIKLRQTYDVFINGTYELILPEDQQIFAYLRKNESHTALIAANLTGTPALFRHSGLPLSSDALVLSNIETEPHKHMTSVLLKPYEARIYLWC

Atome Classification :

(68 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

SUC_B_4(2PWE)
?
[Raw transfer]




SUC_A_3(2PWE)
?
[Raw transfer]




SUC_A_4(4H8U)
?
[Raw transfer]




SUC_A_4(4HPH)
?
[Raw transfer]




SUC_A_4(4HPH)
?
[Raw transfer]




GLC_A_2(3AXI)
MALX3_YEAST
[Raw transfer]




GLC_B_6(4H7V)
?
[Raw transfer]




TEU_B_6(4H8V)
?
[Raw transfer]




GLC_A_4(4H7V)
?
[Raw transfer]




GLC_A_2(3A4A)
MALX3_YEAST
[Raw transfer]




ISL_A_4(4HA1)
?
[Raw transfer]




NOJ_B_6(2PWD)
?
[Raw transfer]




BGC_B_10(3WY3)
?
[Raw transfer]




TEU_B_6(4H8U)
?
[Raw transfer]




NOJ_A_11(3GBE)
?
[Raw transfer]




SUGAR_A_2(2ZID)
DEXB_STRMU
[Raw transfer]

-

NOJ_A_5(2PWD)
?
[Raw transfer]




GLC_A_4(4HOZ)
?
[Raw transfer]




CTS_B_6(2PWG)
?
[Raw transfer]




GLC_A_4(4HP5)
?
[Raw transfer]




GLC_A_2(3AXH)
MALX3_YEAST
[Raw transfer]




BGC_A_6(3WY3)
?
[Raw transfer]




CTS_A_5(2PWG)
?
[Raw transfer]




TRS_B_6(4GO8)
?
[Raw transfer]




GLC_B_6(4HA1)
?
[Raw transfer]




GOL_B_12(4GIA)
?
[Raw transfer]




BGC_A_8(3WY2)
?
[Raw transfer]




GOL_B_15(4GI8)
?
[Raw transfer]




GOL_A_5(4GIA)
?
[Raw transfer]




GOL_A_5(4GI8)
?
[Raw transfer]




BGC_A_2(4WLC)
DEXB_STRMU
[Raw transfer]




BGC_A_8(3WY2)
?
[Raw transfer]




GOL_B_8(4GI9)
?
[Raw transfer]




GOL_B_10(4GI6)
?
[Raw transfer]




GOL_A_3(4GIN)
?
[Raw transfer]




TRS_A_4(4GO8)
?
[Raw transfer]




GOL_A_3(4HOW)
?
[Raw transfer]




TRS_A_2(4M8U)
O16G1_BACSU
[Raw transfer]




GOL_A_5(4GI9)
?
[Raw transfer]




TRS_B_6(1ZJA)
?
[Raw transfer]




GOL_A_5(4AIE)
?
[Raw transfer]




TRS_A_5(1ZJB)
?
[Raw transfer]




GOL_A_5(4AIE)
?
[Raw transfer]




TRS_B_6(1ZJB)
?
[Raw transfer]




GOL_A_5(4GI6)
?
[Raw transfer]




GLO_A_3(4M56)
O16G1_BACSU
[Raw transfer]




GOL_B_11(3WY2)
?
[Raw transfer]




GOL_A_3(4H2C)
?
[Raw transfer]




TRS_A_4(4GO9)
?
[Raw transfer]




TRS_A_2(4MB1)
O16G1_BACSU
[Raw transfer]




TRS_B_6(4GO9)
?
[Raw transfer]




TRS_A_2(4MB1)
O16G1_BACSU
[Raw transfer]




TRS_A_2(4MAZ)
O16G1_BACSU
[Raw transfer]




TRS_A_5(1ZJA)
?
[Raw transfer]




TRS_A_5(1ZJA)
?
[Raw transfer]




GOL_A_3(4M8U)
O16G1_BACSU
[Raw transfer]




TRS_A_5(2ZIC)
DEXB_STRMU
[Raw transfer]




TRS_A_2(4HOX)
?
[Raw transfer]




GOL_A_7(4H2C)
?
[Raw transfer]




GLO_B_7(4M56)
O16G1_BACSU
[Raw transfer]




EDO_A_4(3GBD)
?
[Raw transfer]




MAL_A_2(5A2C)
?
[Raw transfer]




MAL_A_2(5A2B)
?
[Raw transfer]




EDO_A_2(3GBD)
?
[Raw transfer]




GLC_A_3(3AXH)
MALX3_YEAST
[Raw transfer]




104 HHSearch 84.2451% -5 - C1 -1UOK - O16G_BACCE -
1 PsiBlast_PDB 83.2650% -14 - C1 -1UOK - O16G_BACCE -
111 HHSearch 82.2848% -3 - C1 -5DO8 - ? -
2 PsiBlast_PDB 80.2046% -7 - C1 -5DO8 - ? -
6 PsiBlast_PDB 79.8848% 4 - C1 -4M8U 3.6 O16G1_BACSU
60 PsiBlast_CBE 78.8740% -19 - C1 -2PWF - ? -
37 PsiBlast_CBE 78.6940% -16 - C1 -2PWG 3.8 ?
21 PsiBlast_CBE 78.6646% -8 - C1 -5DO8 - ? -
46 PsiBlast_CBE 78.5040% -15 - C1 -1ZJA 2.3 ?
69 PsiBlast_CBE 78.4340% -18 * C1 *4H7V 3.3 ?
109 HHSearch 78.2948% 4 - C1 -4MB1 3.4 O16G1_BACSU
4 PsiBlast_PDB 78.2947% 5 - C1 -4MB1 3.4 O16G1_BACSU
22 PsiBlast_CBE 78.2846% -9 - C1 -5DO8 - ? -
49 PsiBlast_CBE 78.2340% -15 - C1 -4GO9 3.3 ?
43 PsiBlast_CBE 78.2140% -16 - C1 -1ZJB 3.1 ?
45 PsiBlast_CBE 78.1940% -17 - C1 -1ZJA 3.3 ?
47 PsiBlast_CBE 78.1440% -17 - C1 -2PWE 3.8 ?
51 PsiBlast_CBE 78.1140% -18 - C1 -4GIA 2.8 ?
44 PsiBlast_CBE 78.1140% -16 - C1 -1ZJB 3.1 ?
38 PsiBlast_CBE 78.0040% -15 - C1 -2PWG 3.4 ?
3 PsiBlast_PDB 77.9947% 7 - C1 -4MAZ 3.5 O16G1_BACSU
19 PsiBlast_PDB 77.9141% -17 - C1 -4GO8 3.2 ?
55 PsiBlast_CBE 77.9040% -16 - C1 -4GI8 2.9 ?
50 PsiBlast_CBE 77.8040% -16 - C1 -4GO9 3.1 ?
41 PsiBlast_CBE 77.8040% -16 - C1 -2PWD 3.9 ?
67 PsiBlast_CBE 77.7340% -19 - C1 -4H8U 3.2 ?
110 HHSearch 77.7239% -11 - C1 -1ZJA 2.3 ?
32 PsiBlast_CBE 77.6740% -20 - C1 -4H2C 3.9 ?
11 PsiBlast_PDB 77.3245% -33 - C1 -4WLC 4.6 DEXB_STRMU
20 PsiBlast_PDB 77.3040% -21 - C1 -4GIN 4.0 ?
56 PsiBlast_CBE 77.2840% -16 - C1 -4GI8 4.2 ?
65 PsiBlast_CBE 77.1640% -19 - C1 -4HA1 4.2 ?
10 PsiBlast_PDB 77.0546% -34 - C1 -2ZIC 3.5 DEXB_STRMU
70 PsiBlast_CBE 76.8940% -17 - C1 -4H7V 4.7 ?
16 PsiBlast_PDB 76.8341% -10 - C1 -4HPH 4.5 ?
17 PsiBlast_PDB 76.8241% -13 - C1 -4HP5 5.0 ?
66 PsiBlast_CBE 76.7840% -19 - C1 -4HA1 3.6 ?
53 PsiBlast_CBE 76.7740% -18 - C1 -4GI9 2.9 ?
42 PsiBlast_CBE 76.7740% -14 - C1 -2PWD 3.9 ?
58 PsiBlast_CBE 76.5940% -17 - C1 -4GI6 3.9 ?
57 PsiBlast_CBE 76.5840% -15 - C1 -4GI6 2.7 ?
54 PsiBlast_CBE 76.5740% -15 - C1 -4GI9 3.8 ?
33 PsiBlast_CBE 76.5741% -9 - C1 -3GBE 3.3 ?
30 PsiBlast_CBE 76.5541% -16 - C1 -4GO8 3.1 ?
52 PsiBlast_CBE 76.4840% -17 - C1 -4GIA 3.0 ?
5 PsiBlast_PDB 76.4747% 6 - C1 -4M56 2.4 O16G1_BACSU
14 PsiBlast_PDB 76.3341% -10 - C1 -4HOW 3.2 ?
108 HHSearch 76.2641% -8 - C1 -4HPH 3.9 ?
68 PsiBlast_CBE 76.2140% -17 - C1 -4H8U 4.4 ?
34 PsiBlast_CBE 76.1941% -10 - C1 -3GBD 3.3 ?
15 PsiBlast_PDB 76.1941% -8 - C1 -4HOX 3.5 ?
39 PsiBlast_CBE 75.9440% -16 - C1 -4H8V 3.6 ?
13 PsiBlast_PDB 75.5045% -34 - C1 -2ZID 4.3 DEXB_STRMU
18 PsiBlast_PDB 75.1841% -11 - C1 -4HOZ 4.0 ?
31 PsiBlast_CBE 75.1640% -22 - C1 -4AIE 3.3 ?
113 HHSearch 75.0942% -5 - C1 -4AIE 3.3 ?
23 PsiBlast_CBE 74.8147% 5 - C1 -4M56 2.6 O16G1_BACSU
48 PsiBlast_CBE 74.3640% -16 - C1 -2PWE 3.8 ?
75 PsiBlast_CBE 72.7439% 29 - C1 -3AXH 4.1 MALX3_YEAST
74 PsiBlast_CBE 71.7639% 29 - C1 -3AXI 3.6 MALX3_YEAST
72 PsiBlast_CBE 70.7839% 30 - C1 -3A4A 3.9 MALX3_YEAST
116 HHSearch 60.7834% -2 - C1 -3WY2 3.7 ?
78 PsiBlast_CBE 58.4234% 1 - C1 -3WY2 3.6 ?
81 PsiBlast_CBE 57.5734% 1 - C1 -3WY3 3.0 ?
77 PsiBlast_CBE 56.5334% 1 - C1 -3WY2 3.1 ?
82 PsiBlast_CBE 56.3434% 0 - C1 -3WY3 4.0 ?
89 PsiBlast_CBE 19.3234% 21 - C1 -5A2C 2.8 ?
90 PsiBlast_CBE 18.7934% 21 - C1 -5A2B 2.4 ?