@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : bsu31970: (2016-07-23 )
MAIPAIQPYQMPTASDMPQNKVSWVPDPNRAVLLIHDMQNYFVDAFTAGASPVTELSANIRKLKNQCVQLGIPVVYTAQPGSQNPDDRALLTDFWGPGLNSGPYEEKIITELAPEDDDLVLTKWRYSAFKRTNLLEMMRKEGRDQLIITGIYAHIGCLVTACEAFMEDIKAFFVGDAVADFSLEKHQMALEYAAGRCAFTVMTDSLLDQLQNAPADVQKTSANTGKKNVFTCENIRKQIAELLQETPEDITDQEDLLDRGLDSVRIMTLVEQWRREGAEVTFVELAERPTIEEWQKLLTTRSQQVLPNADYL

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

ISC_A_2(3TG2)
VIBB_VIBCH
[Raw transfer]




QLI_B_6(3R77)
PHZD_PSEFL
[Raw transfer]




ISC_A_2(3TG2)
VIBB_VIBCH
[Raw transfer]




QLI_A_3(3R77)
PHZD_PSEFL
[Raw transfer]




ISC_E_5(1NF8)
?
[Raw transfer]




FMT_E_5(1NF9)
?
[Raw transfer]




FMT_E_5(1NF9)
?
[Raw transfer]




BOG_A_2(3TB4)
VIBB_VIBCH
[Raw transfer]




42 HHSearch 92.9850%-125 - C5 -2FQ1 - ENTB_ECOLI -
64 Fugue 92.4649%-125 - C5 -2FQ1 - ENTB_ECOLI -
21 PsiBlast_CBE 90.6348%-123 - C5 -2FQ1 - ENTB_ECOLI -
1 PsiBlast_PDB 89.8548%-123 - C5 -2FQ1 - ENTB_ECOLI -
44 HHSearch 81.4150%-141 - C5 -1NF9 1.9 ?
43 HHSearch 81.2053%-127 - C5 -3TG2 6.0 VIBB_VIBCH
6 PsiBlast_PDB 80.9546%-141 - C5 -3R77 6.9 PHZD_PSEFL
22 PsiBlast_CBE 80.2146%-138 - C5 -3R77 6.7 PHZD_PSEFL
3 PsiBlast_PDB 80.1857%-131 - C5 -3TG2 6.0 VIBB_VIBCH
2 PsiBlast_PDB 78.7657%-128 - C5 -3TB4 6.3 VIBB_VIBCH
65 Fugue 74.4950% -75 - C5 -1NF9 - ? -
5 PsiBlast_PDB 71.0648% -58 - C5 -1NF8 7.3 ?
4 PsiBlast_PDB 69.4949% -56 - C5 -1NF9 1.9 ?
61 HHSearch 58.5026%-132 - C5 -4H17 - ? -
54 HHSearch 54.4623% -86 - C5 -3TXY - ? -
55 HHSearch 54.2426%-127 - C5 -3EEF - ? -
57 HHSearch 53.0419% -96 - C5 -3MCW - ? -
66 Fugue 50.7520% -84 - C5 -1J2R - YECD_ECOLI -
45 HHSearch 49.9322% -30 * C5 *3IRV - ? -
49 HHSearch 47.8220% -64 - C5 -3OT4 - ? -