@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : bsu32070: (2016-07-23 )
MMLNMIRRLLMTCLFLLAFGTTFLSVSGIEAKDLSKWVQEHQEKHLKHAGLRLKALQQKQTQTTSAAEDKTKPLEEAFDWDEYPVQRVTATGYTAGAESTGKNPGDPLYGLTYSGVKVKRDLYSTVAADPSVFPIGTILFIPNYGLGVVADTGSAIKGNRLDLYFETVKDVYNEWGKKTLDVYVIKKGTGKITEDELEKLNETKSLQVFRNQYKTVKE

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

3QL_A_3(4WLK)
YUIC_BACSU
[Raw transfer]




3QL_B_4(4WLK)
YUIC_BACSU
[Raw transfer]




NAG_B_5(4WJT)
YUIC_BACSU
[Raw transfer]




NAG_A_3(4WJT)
YUIC_BACSU
[Raw transfer]




NAG_A_3(4WJT)
YUIC_BACSU
[Raw transfer]




NAG_A_3(4WJT)
YUIC_BACSU
[Raw transfer]




EDO_A_5(4WLI)
YUIC_BACSU
[Raw transfer]




28 Fugue 84.45100% -92 - C3 -4WJT 3.2 YUIC_BACSU
18 HHSearch 84.45100% -92 - C3 -4WJT 3.2 YUIC_BACSU
1 PsiBlast_PDB 84.45100% -92 - C3 -4WJT 3.2 YUIC_BACSU
2 PsiBlast_PDB 84.13100% -90 - C3 -4WLK 5.4 YUIC_BACSU
16 PsiBlast_CBE 83.94100% -93 - C3 -4WJT 3.0 YUIC_BACSU
17 PsiBlast_CBE 82.64100% -98 - C3 -4WLK 5.3 YUIC_BACSU
3 PsiBlast_PDB 81.65100%-105 - C3 -4WLI 2.1 YUIC_BACSU
19 HHSearch 44.5031% -29 - C3 -2AE0 - MLTA_ECOLI -
20 HHSearch 42.9229% -40 - C3 -3CZB - ? -
21 HHSearch 42.0524% -58 * C3 *2PNW - ? -
7 PsiBlast_PDB 40.5131% -56 - C3 -2PJJ - MLTA_ECOLI -
30 Fugue 40.0112% 44 - C2 -1QH5 - GLO2_HUMAN -
13 PsiBlast_PDB 39.8935%-214 - C2 -4BQE - PHS2_ARATH -
22 HHSearch 39.4728% -24 - C3 -2G5D - ? -
6 PsiBlast_PDB 38.9031% -44 - C3 -2PI8 - MLTA_ECOLI -
8 PsiBlast_PDB 38.4431% -57 - C3 -2PIC - MLTA_ECOLI -
5 PsiBlast_PDB 37.7832% -46 - C3 -2GAE - MLTA_ECOLI -
15 PsiBlast_PDB 37.6535%-197 - C2 -4BQI - PHS2_ARATH -
4 PsiBlast_PDB 37.5332% -60 - C3 -2AE0 - MLTA_ECOLI -
14 PsiBlast_PDB 36.2335%-196 - C2 -4BQF - PHS2_ARATH -