@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : bsu32170: (2016-07-23 )
MNSFRFTKMHGLGNSYIYVNQFEEQLPEEKLSEIAIQVSSVYTGIGSDGMILICPSDQAPVKMRIFNNDGSEGKNCGNGLRCVAKYAYEHKLVEETSFLIETLSGLVKAEVQVENGKVNVVTVDMGEPRLTKSELPMLDGGEEHTINETMAFGEVELTGTAVSMGNPHIVFPIADIEQAPLTTLGPVIEKDPRFPEGINVEFVETVNEQELHFRVWERGSGITQACGTGACAAAVASVLNGVSKRNQDITVHLAGGDLVINWKDNGHVMMTGPAETVCEGVYFL

Atome Classification :

(24 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

ZDR_A_2(2GKJ)
DAPF_HAEIN
[Raw transfer]



ZDP_A_2(2GKE)
DAPF_HAEIN
[Raw transfer]



ZDP_A_2(2GKE)
DAPF_HAEIN
[Raw transfer]



TLA_A_2(2Q9H)
DAPF_HAEIN
[Raw transfer]



EDO_A_3(2Q9J)
DAPF_HAEIN
[Raw transfer]
1 PsiBlast_PDB 90.4867%-118 - C4 -2OTN - DAPF_BACAN -
38 HHSearch 78.2961% -70 - C4 -2OTN - DAPF_BACAN -
5 PsiBlast_PDB 63.4636% -53 - C4 -4IJZ - DAPF_ECOLI -
31 PsiBlast_CBE 62.9336% -46 - C4 -4IK0 - DAPF_ECOLI -
32 PsiBlast_CBE 62.8936% -43 - C4 -4IJZ - DAPF_ECOLI -
4 PsiBlast_PDB 62.8536% -48 - C4 -4IK0 - DAPF_ECOLI -
37 HHSearch 61.7137% -30 * C4 *5HA4 - DAPF_ACIB3 -
23 PsiBlast_CBE 61.3341% -12 - C4 -3EKM - DAPF_ARATH -
3 PsiBlast_PDB 60.7841% -11 - C4 -3EKM - DAPF_ARATH -
2 PsiBlast_PDB 60.7441% -11 - C4 -3EJX - DAPF_ARATH -
22 PsiBlast_CBE 60.6841% -12 - C4 -3EKM - DAPF_ARATH -
27 PsiBlast_CBE 60.6141% -13 - C4 -3EJX - DAPF_ARATH -
24 PsiBlast_CBE 60.6041% -12 - C4 -3EKM - DAPF_ARATH -
28 PsiBlast_CBE 60.4941% -14 - C4 -3EJX - DAPF_ARATH -
34 HHSearch 60.4741% -23 - C4 -3EJX - DAPF_ARATH -
26 PsiBlast_CBE 60.4641% -12 - C4 -3EJX - DAPF_ARATH -
21 PsiBlast_CBE 60.3141% -13 - C4 -3EKM - DAPF_ARATH -
30 PsiBlast_CBE 60.2841% -12 - C4 -3EJX - DAPF_ARATH -
35 HHSearch 60.2635% -36 - C4 -2GKE 4.1 DAPF_HAEIN
29 PsiBlast_CBE 60.2241% -11 - C4 -3EJX - DAPF_ARATH -
9 PsiBlast_PDB 57.9836% -24 - C4 -2GKJ 4.1 DAPF_HAEIN
8 PsiBlast_PDB 57.5736% -24 - C4 -2GKE 4.1 DAPF_HAEIN
10 PsiBlast_PDB 57.5435% -27 - C4 -2Q9H 3.8 DAPF_HAEIN
12 PsiBlast_PDB 56.5935% -30 - C4 -2Q9J 2.1 DAPF_HAEIN