@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : bsu32690: (2016-07-24 )
MNITDIREQFPILHQQVNGHDLVYLDSAATSQKPRAVIETLDKYYNQYNSNVHRGVHTLGTRATDGYEGAREKVRKFINAKSMAEIIFTKGTTTSLNMVALSYARANLKPGDEVVITYMEHHANIIPWQQAVKATGATLKYIPLQEDGTISLEDVRETVTSNTKIVAVSHVSNVLGTVNPIKEMAKIAHDNGAVIVVDGAQSTPHMKIDVQDLDCDFFALSSHKMCGPTGVGVLYGKKALLENMEPAEFGGEMIDFVGLYESTWKELPWKFEAGTPIIAGAIGLGAAIDFLEEIGLDEISRHEHKLAAYALERFRQLDGVTVYGPEERAGLVTFNLDDVHPHDVATVLDAEGIAVRAGHHCAQPLMKWLDVTATARASFYLYNTEEEIDKLVEALQKTKEYFTNVF

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

GOL_A_5(4LW2)
CSDA_ECOLI
[Raw transfer]



LPG_C_3(1I29)
SUFS_ECOLI
[Raw transfer]



GOL_C_9(4LW2)
CSDA_ECOLI
[Raw transfer]



ACY_E_5(1C0N)
SUFS_ECOLI
[Raw transfer]



PLP_B_5(1T3I)
CSD_SYNY3
[Raw transfer]



PLP_A_3(1JF9)
SUFS_ECOLI
[Raw transfer]



PLP_E_5(1I29)
SUFS_ECOLI
[Raw transfer]



PLP_B_6(4LW4)
CSDA_ECOLI
[Raw transfer]



PLP_B_6(4LW2)
CSDA_ECOLI
[Raw transfer]



CYS_E_5(1ECX)
?
[Raw transfer]



PLP_A_3(1C0N)
SUFS_ECOLI
[Raw transfer]



PLP_C_8(4LW2)
CSDA_ECOLI
[Raw transfer]



PLP_A_4(4LW2)
CSDA_ECOLI
[Raw transfer]



PLP_A_4(4LW2)
CSDA_ECOLI
[Raw transfer]



SLP_A_4(3A9Z)
SCLY_RAT
[Raw transfer]
1 PsiBlast_PDB 84.6151% -86 - C1 -4Q76 - CNIF1_ARATH -
88 HHSearch 82.6653% -86 - C- -4Q75 - CNIF1_ARATH -
5 PsiBlast_PDB 82.1448% -92 - C1 -1C0N 3.7 SUFS_ECOLI
4 PsiBlast_PDB 82.0648% -89 - C1 -1JF9 3.9 SUFS_ECOLI
2 PsiBlast_PDB 81.8151% -85 - C- -4Q75 - CNIF1_ARATH -
21 PsiBlast_CBE 81.7550% -87 - C1 -1T3I 3.2 CSD_SYNY3
3 PsiBlast_PDB 81.6848% -91 - C1 -1I29 4.7 SUFS_ECOLI
6 PsiBlast_PDB 81.0745% -92 - C1 -4W91 - ? -
85 HHSearch 80.6346% -92 - C1 -4W91 - ? -
27 PsiBlast_CBE 80.2245% -92 - C1 -4W91 - ? -
26 PsiBlast_CBE 80.0145% -92 - C1 -4W91 - ? -
84 HHSearch 79.8043%-110 - C1 -4LW2 3.4 CSDA_ECOLI
8 PsiBlast_PDB 79.3241%-115 - C1 -4LW4 - CSDA_ECOLI -
28 PsiBlast_CBE 79.2741%-111 - C1 -4LW4 3.7 CSDA_ECOLI
7 PsiBlast_PDB 79.2641%-110 - C1 -4LW2 3.4 CSDA_ECOLI
29 PsiBlast_CBE 79.0341%-113 - C1 -4LW2 3.4 CSDA_ECOLI
30 PsiBlast_CBE 79.0241%-108 - C1 -4LW2 3.6 CSDA_ECOLI
22 PsiBlast_CBE 71.7245% -72 - C1 -4W91 - ? -
25 PsiBlast_CBE 70.1545% -56 - C1 -4W91 - ? -
24 PsiBlast_CBE 70.1245% -56 - C1 -4W91 - ? -