@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : bsu32830: (2016-07-24 )
MKEAVIVSGARTPVGKAKKGSLATVRPDDLGAICVKETLKRAGGYEGNIDDLIIGCATPEAEQGLNMARNIGALAGLPYTVPAITVNRYCSSGLQSIAYAAEKIMLGAYDTAIAGGAESMSQVPMMGHVTRPNLALAEKAPEYYMSMGHTAEQVAKKYGVSREDQDAFAVRSHQNAAKALAEGKFKDEIVPVEVTVTEIGEDHKPMEKQFVFSQDEGVRPQTTADILSTLRPAFSVDGTVTAGNSSQTSDGAAAVMLMDREKADALGLAPLVKFRSFAVGGVPPEVMGIGPVEAIPRALKLAGLQLQDIGLFELNEAFASQAIQVIRELGIDEEKVNVNGGAIALGHPLGCTGTKLTLSLIHEMKRRNEQFGVVTMCIGGGMGAAGVFELC

Atome Classification :

(30 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

COA_A_3(4XL4)
?
[Raw transfer]



COA_B_9(4XL4)
?
[Raw transfer]



COA_A_5(1WL4)
THIC_HUMAN
[Raw transfer]



GOL_A_3(4XL3)
?
[Raw transfer]



COA_B_13(4UBV)
?
[Raw transfer]



GOL_B_14(4XL2)
THLA_CLOAB
[Raw transfer]



GOL_A_8(4XL2)
THLA_CLOAB
[Raw transfer]



GOL_B_7(4XL3)
?
[Raw transfer]



GOL_A_6(4XL3)
?
[Raw transfer]



PEG_A_5(4WYR)
THLA_CLOAB
[Raw transfer]



PEG_B_8(4WYR)
THLA_CLOAB
[Raw transfer]



DMS_A_14(4UBW)
?
[Raw transfer]
3 PsiBlast_PDB 95.8748% -75 - C8 -2C7Y - THIK2_ARATH -
4 PsiBlast_PDB 95.1948% -76 - C8 -2C7Z - THIK2_ARATH -
6 PsiBlast_PDB 92.8247% -75 - C8 -2IIK - THIK_HUMAN -
21 PsiBlast_CBE 88.9648% -31 - C8 -2WU9 - THIK2_ARATH -
2 PsiBlast_PDB 88.7548% -30 - C8 -2WU9 - THIK2_ARATH -
101 HHSearch 88.3349% -33 - C8 -2WU9 - THIK2_ARATH -
1 PsiBlast_PDB 86.7547% -31 - C- -2WUA - ? -
112 HHSearch 83.3746% -19 - C8 -1WDK - FADA_PSEFR -
115 HHSearch 83.3148% -25 * C8 *4WYS - ATOB_ECOLI -
12 PsiBlast_PDB 83.2245% -14 - C8 -3GOA - FADA_SALTY -
7 PsiBlast_PDB 83.1245% -14 - C8 -1WDK - FADA_PSEFR -
104 HHSearch 82.8347% -9 - C8 -3GOA - FADA_SALTY -
25 PsiBlast_CBE 82.7245% -12 - C8 -1WDK - FADA_PSEFR -
10 PsiBlast_PDB 82.6945% -14 - C8 -2D3T - FADA_PSEFR -
24 PsiBlast_CBE 82.5245% -14 - C8 -1WDL - FADA_PSEFR -
108 HHSearch 82.1845% -9 - C8 -4W61 - BKTB_CUPNH -
20 PsiBlast_PDB 82.1641% -10 - C8 -4XL4 6.0 ?
107 HHSearch 82.1247% -8 - C8 -2IIK - THIK_HUMAN -
22 PsiBlast_CBE 82.1145% -12 - C8 -2D3T - FADA_PSEFR -
114 HHSearch 82.0848% -13 - C8 -1ULQ - ? -
110 HHSearch 82.0442% -21 - C8 -1WL4 6.2 THIC_HUMAN
19 PsiBlast_PDB 80.9541% -10 - C8 -4XL3 2.5 ?
34 PsiBlast_CBE 80.8841% -12 - C8 -4XL4 6.1 ?
35 PsiBlast_CBE 80.3441% -10 - C8 -4XL3 2.4 ?
32 PsiBlast_CBE 79.5041% -15 - C8 -4XL2 2.4 THLA_CLOAB
16 PsiBlast_PDB 79.1841% -8 - C8 -4WYR 2.1 THLA_CLOAB
31 PsiBlast_CBE 78.7341% -14 - C8 -4XL2 2.4 THLA_CLOAB
94 PsiBlast_CBE 77.9438% -2 - C8 -4UBW 3.1 ?
95 PsiBlast_CBE 77.5838% 1 - C8 -4UBV 4.1 ?
30 PsiBlast_CBE 76.7541% -7 - C8 -4WYR 1.9 THLA_CLOAB