@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : bsu32850: (2016-07-25 )
MVITRDFFLFLSKSGFLNKMARNWGSRIAAGKIIGGNDFNSSIPTIRQLNSQGLSVTVDHLGEFVNSAEVARERTEECIQTIATIADQELNSHVSLKMTSLGLDIDMDLVYENMTKILQTAEKHKIMVTIDMEDEVRCQKTLDIFKDFRKKYEHVSTVLQAYLYRTEKDIDDLDSLNPFLRLVKGAYKESEKVAFPEKSDVDENYKKIIRKQLLNGHYTAIATHDDKMIDFTKQLAKEHGIANDKFEFQMLYGMRSQTQLSLVKEGYNMRVFLPYGEDWYGYFMRRLAERPSNIAFAFKGMTKK

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

FAD_A_3(4H6Q)
?
[Raw transfer]




FDA_C_4(4H6R)
?
[Raw transfer]




FAD_A_3(4H6Q)
?
[Raw transfer]




FAD_C_6(4H6Q)
?
[Raw transfer]




FDA_A_3(4H6R)
?
[Raw transfer]




FAD_D_4(2G37)
?
[Raw transfer]




FAD_C_3(2G37)
?
[Raw transfer]




9 PsiBlast_PDB 84.9026% 0 - C- -4NMF - ? -
21 PsiBlast_CBE 75.3041% 1 - C2 -4H6R 8.2 ?
1 PsiBlast_PDB 75.2841% 2 - C2 -4H6Q 10.2 ?
2 PsiBlast_PDB 74.9641% -1 - C2 -4H6R 8.8 ?
22 PsiBlast_CBE 74.7141% 1 - C2 -4H6Q 10.7 ?
3 PsiBlast_PDB 74.5039% -74 - C2 -2G37 11.4 ?
25 HHSearch 74.4640% 3 * C2 *4H6Q 10.2 ?
23 PsiBlast_CBE 73.4939% -76 - C2 -2G37 11.0 ?
6 PsiBlast_PDB 65.0026% 8 - C2 -4NMB - ? -
8 PsiBlast_PDB 64.9026% -3 - C2 -4NME - ? -
4 PsiBlast_PDB 64.8326% 5 - C2 -4NM9 - ? -
7 PsiBlast_PDB 64.6726% 4 - C2 -4NMD - ? -
5 PsiBlast_PDB 64.6126% 5 - C2 -4NMA - ? -
50 Fugue 59.7627% 21 - C2 -4Q71 - ? -
29 HHSearch 51.2825% 8 - C2 -3HAZ - ? -
12 PsiBlast_PDB 49.1823% 4 - C2 -4Q72 - ? -
11 PsiBlast_PDB 48.6623% 6 - C2 -4Q71 - ? -
13 PsiBlast_PDB 48.5823% 10 - C2 -4Q73 - ? -
10 PsiBlast_PDB 48.4423% 6 - C2 -3HAZ - ? -
38 HHSearch 31.2616% -55 - C2 -3KWS - ? -