@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : bsu33040: (2016-07-25 )
MEYRIERDTMGEVKVPADKFWGAQTQRSKENFKIGSEKMPMRVVKAFAILKRSTALANKRLGNLDAEKAEAIAAVCDDVLKGKYDDNFPLVVWQTGSGTQSNMNMNEVVANRATALLKEKNSDQTIHPNDDVNRSQSSNDTFPTAMHVAAVLAVYEQLVPALDQLRNTLDEKAKAYNDIVKIGRTHLQDATPLTLGQEISGWVHMLDRSKEMILEATDKMRALAIGGTAVGTGINAHPEFGELVSEEITKLTGQTFSSSPNKFHALTSHDEITYAHGALKALAADLMKIANDVRWLASGPRCGIGEIVIPENEPGSSIMPGKVNPTQSEALTMIAAQIMGNDATIGFAASQGNFELNVFKPVIIYNFLQSVQLLSDGMNSFHDKCAVGIEPNKETIQENLSNSLMLVTALNPHIGYENAAKIAKLAHKEGLTLKEAALKLELLTEEQFNEMVKPEDMVKPKA

Atome Classification :

(22 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

PMA_A_9(1FUP)
FUMC_ECOLI
[Raw transfer]



PMA_B_11(1FUP)
FUMC_ECOLI
[Raw transfer]



CIT_A_9(1FUO)
FUMC_ECOLI
[Raw transfer]



CIT_A_5(2FUS)
FUMC_ECOLI
[Raw transfer]



CIT_A_4(1FUQ)
FUMC_ECOLI
[Raw transfer]



CIT_G_7(1KQ7)
FUMC_ECOLI
[Raw transfer]



CIT_B_7(2FUS)
FUMC_ECOLI
[Raw transfer]



LMR_B_5(3RRP)
?
[Raw transfer]



LMR_A_3(3RRP)
?
[Raw transfer]



CIT_I_9(1KQ7)
FUMC_ECOLI
[Raw transfer]



CIT_B_6(1FUQ)
FUMC_ECOLI
[Raw transfer]



CIT_B_11(1FUO)
FUMC_ECOLI
[Raw transfer]



UNL_A_3(3TV2)
?
[Raw transfer]
3 PsiBlast_PDB 89.3764% -2 - C4 -1YFE - FUMC_ECOLI -
1 PsiBlast_PDB 88.8361% -8 - C4 -3TV2 2.8 ?
23 PsiBlast_CBE 88.2364% -1 - C4 -1FUP 4.6 FUMC_ECOLI
24 PsiBlast_CBE 87.9963% -2 - C4 -1KQ7 2.5 FUMC_ECOLI
22 PsiBlast_CBE 87.8364% -0 - C4 -1FUQ 2.8 FUMC_ECOLI
21 PsiBlast_CBE 87.7164% -3 - C4 -1FUO 3.6 FUMC_ECOLI
26 PsiBlast_CBE 87.5563% -1 - C4 -1FUR - FUMC_ECOLI -
25 PsiBlast_CBE 87.0663% 2 - C4 -2FUS 2.7 FUMC_ECOLI
2 PsiBlast_PDB 86.9464% -2 - C4 -1FUO 3.6 FUMC_ECOLI
5 PsiBlast_PDB 86.7864% 2 - C4 -1FUQ 3.6 FUMC_ECOLI
7 PsiBlast_PDB 86.7563% 1 - C4 -1FUR - FUMC_ECOLI -
6 PsiBlast_PDB 86.7063% 1 - C4 -1KQ7 3.5 FUMC_ECOLI
4 PsiBlast_PDB 86.2664% 1 - C4 -1FUP 4.2 FUMC_ECOLI
8 PsiBlast_PDB 86.2063% 2 - C4 -2FUS 3.5 FUMC_ECOLI
12 PsiBlast_PDB 84.2956% -11 - C4 -4HGV - FUMC_RHIME -
46 PsiBlast_CBE 83.1246% -28 - C4 -4APB - FUMC_MYCTU -
69 HHSearch 82.9247% -28 - C4 -4ADM - FUMC_MYCTU -
19 PsiBlast_PDB 82.7946% -29 - C4 -4APB - FUMC_MYCTU -
10 PsiBlast_PDB 82.7556% 1 - C4 -3GTD - FUMC_RICPR -
48 PsiBlast_CBE 81.8446% -28 - C4 -4APB - FUMC_MYCTU -
49 PsiBlast_CBE 80.6947% -16 - C4 -3RRP 2.3 ?
20 PsiBlast_PDB 80.6347% -15 - C4 -3RRP 2.2 ?