@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : bsu33290: (2016-07-26 )
MNSLSTEQLGIGYGDRVIVEDLNISIPKGKITTLIGPNGCGKSTILKTMSRIMRSHAGAVYLNGKAIHKMSTKDIAKDMAILPQTPEAPSGLTVHELVSYGRFPHQSGFGRLNDEDRRIIKWALEETGMAEYAERPIEALSGGQRQRVWIAMALAQGTELLLLDEPTTYLDLAHQLEILQLLDRLNKEQGRTILMVIHDLNHAARFSHYMIALKKGTVIKEGTALEVMTPDILKQVFQIDAEIVTDPRTNKPVCLTYDLIKNEKELVTV

Atome Classification :

(24 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

ANP_C_9(4R9U)
BTUD_ECOLI
[Raw transfer]



ATP_D_15(2IXF)

[Raw transfer]



ANP_D_11(4R9U)
BTUD_ECOLI
[Raw transfer]



ATP_B_6(1L2T)
Y796_METJA
[Raw transfer]



ATP_C_12(2IXF)
TAP1_RAT
[Raw transfer]



ATP_B_8(2IXF)
TAP1_RAT
[Raw transfer]



ATP_A_5(2IXF)
TAP1_RAT
[Raw transfer]
1 PsiBlast_PDB 80.2831% -65 - C1 -4G1U - HMUV_YERPE -
21 PsiBlast_CBE 79.4931% -65 - C1 -4G1U - HMUV_YERPE -
48 HHSearch 77.8728%-134 - C1 -3RLF - MALK_ECOLI -
33 PsiBlast_CBE 75.8233% -46 - C1 -4DBL - BTUD_ECOLI -
36 PsiBlast_CBE 75.1233% -53 - C1 -4R9U 3.1 BTUD_ECOLI
35 PsiBlast_CBE 74.5233% -46 - C1 -4DBL - BTUD_ECOLI -
38 PsiBlast_CBE 74.0533% -52 - C1 -4FI3 - BTUD_ECOLI -
32 PsiBlast_CBE 73.2133% -45 - C1 -4DBL - BTUD_ECOLI -
39 PsiBlast_CBE 72.8833% -52 - C1 -4FI3 - BTUD_ECOLI -
34 PsiBlast_CBE 72.1133% -46 - C1 -4DBL - BTUD_ECOLI -
37 PsiBlast_CBE 70.9833% -56 - C1 -4R9U 4.1 BTUD_ECOLI
44 HHSearch 69.0729%-118 - C1 -2IT1 - ? -
42 HHSearch 66.7525%-125 - C1 -4YER - ? -
2 PsiBlast_PDB 66.6431% -19 - C1 -2NQ2 - Y1470_HAEIN -
40 HHSearch 65.7525%-133 * C1 *4TQU - ? -
45 HHSearch 63.2228% -40 - C1 -3FVQ - FBPC_NEIG1 -
47 HHSearch 61.9926%-125 - C1 -1V43 - ? -
17 PsiBlast_PDB 60.5329% -37 - C1 -3RLF - MALK_ECOLI -
22 PsiBlast_CBE 59.9835% 36 - C1 -1L2T 4.5 Y796_METJA
50 HHSearch 59.6327% -2 - C1 -3TUI - METN_ECOLI -
30 PsiBlast_CBE 48.3531% -31 - C1 -2IXF 6.0 TAP1_RAT
28 PsiBlast_CBE 45.5731% -30 - C1 -2IXF 6.2
29 PsiBlast_CBE 45.3031% -33 - C1 -2IXF 6.2 TAP1_RAT
31 PsiBlast_CBE 44.5831% -31 - C1 -2IXF 5.9 TAP1_RAT