@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : bsu33430: (2016-07-26 )
MVTKILKAPDGSPSDVERIKKESDYLRGTLKEVMLDRISAGIPDDDNRLMKHHGSYLQDDRDLRNERQKQKLEPAYQFMLRVRMPGGVSTPEQWLVMDDLSQKYGNGTLKLTTRETFQMHGILKWNMKKTIQTIHSALLDTIAACGDVNRNVMCASNPYQSEIHSEVYEWSKKLSDDLLPRTRAYHEIWLDEERVAGTPEEEVEPMYGPLYLPRKFKIGIAVPPSNDIDVFSQDLGFIAIVEDGKLIGFNVAIGGGMGMTHGDTATYPQLAKVIGFCRPEQMYDVAEKTITIQRDYGNRSVRKNARFKYTVDRLGLENVKEELENRLGWSLEEAKPYHFDHNGDRYGWVEGIEDKWHFTLFVEGGRITDYDDYKLMTGLREIAKVHTGEFRLTANQNLMIANVSSDKKEEISALIEQYGLTDGKHYSALRRSSMACVALPTCGLAMAEAERYLPTLLDKIEEIIDENGLRDQEITIRMTGCPNGCARHALGEIGFIGKAPGKYNMYLGAAFDGSRLSKMYRENIGEADILSELRILLSRYAKEREEGEHFGDFVIRAGIIKATTDGTNFHD

Atome Classification :

(21 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

SRM_A_5(2GEP)
CYSI_ECOLI
[Raw transfer]



SRM_A_6(4G39)
CYSI_ECOLI
[Raw transfer]



SRM_A_5(4HTR)
CYSI_ECOLI
[Raw transfer]



SRM_A_5(4G38)
CYSI_ECOLI
[Raw transfer]



SRM_A_5(4G38)
CYSI_ECOLI
[Raw transfer]



SRM_A_5(3GEO)
CYSI_ECOLI
[Raw transfer]



SF4_A_5(4G39)
CYSI_ECOLI
[Raw transfer]



SF4_A_4(4G38)
CYSI_ECOLI
[Raw transfer]



SRM_A_5(1AOP)
?
[Raw transfer]
2 PsiBlast_PDB 78.9851% 0 - C3 -4G39 11.2 CYSI_ECOLI
4 PsiBlast_PDB 78.9351% 4 - C3 -2GEP 11.4 CYSI_ECOLI
5 PsiBlast_PDB 77.6051% 3 - C3 -3GEO 9.4 CYSI_ECOLI
3 PsiBlast_PDB 77.0752% 4 - C3 -4HTR 8.6 CYSI_ECOLI
1 PsiBlast_PDB 77.0251% 1 - C3 -4G38 9.0 CYSI_ECOLI
31 HHSearch 75.1851% 13 - C3 -4G38 11.2 CYSI_ECOLI
21 Fugue 57.1024% 27 - C3 -1ZJ8 - SIR_MYCTU -
32 HHSearch 56.8323% 22 - C3 -1ZJ8 - SIR_MYCTU -
7 PsiBlast_PDB 56.4726% 3 - C3 -1ZJ9 - SIR_MYCTU -
6 PsiBlast_PDB 56.2126% 2 - C3 -1ZJ8 - SIR_MYCTU -
33 HHSearch 51.4922% 18 - C3 -2AKJ - NIR_SPIOL -
34 HHSearch 51.3223% 26 - C3 -3B0G - ? -
22 Fugue 50.3051% -78 - C3 -1AOP - ? -
23 Fugue 49.8252%-107 - C3 -1AOP - ? -
15 PsiBlast_PDB 48.3324% 27 - C3 -3B0H - ? -
14 PsiBlast_PDB 47.0026% 13 - C3 -3B0M - ? -
20 PsiBlast_PDB 46.8526% 12 - C3 -3VKP - ? -
11 PsiBlast_PDB 46.7826% 11 - C3 -3VLZ - ? -
10 PsiBlast_PDB 46.7826% 13 - C3 -3VLY - ? -
12 PsiBlast_PDB 46.6626% 15 - C3 -3VM0 - ? -
25 Fugue 35.9445% -98 - C3 -1AOP Error ?