@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : bsu33440: (2016-07-26 )
MQLQVMNSPFNQEQAELLNRLLPTLTESQKIWLSGYLSAQSVSAQEAAGTPAAAVSAEAPAPAVSKEVTVLYGSQTGNAQGLAENAGKQLEQSGFQVTVSSMSDFKPNQLKKVTNLLIVVSTHGEGEPPDNALSFHEFLHGRRAPKLEDLRFSVLALGDSSYEFFCQTGKEFDQRLEELGGKRISPRVDCDLDYDEPAAEWLEGVLKGLNEAGGGSAAPAPAAASQTGESSYSRTNPFRAEVLENLNLNGRGSNKETRHVELSLEGSGLTYEPGDSLGVYPENDPELVELLLKEMNWDPEEIVTLNKQGDVRPLKEALISHYEITVLTKPLLEQAAQLTGNDELRELLAPGNEENVKAYIEGRDLLDLVRDYGPFSVSAQEFVSILRKMPARLYSIASSLSANPDEVHLTIGAVRYDAHGRERKGVCSILCAERLQPGDTLPVYVQHNQNFKLPKDPETPIIMVGPGTGVAPFRSFMQEREETGAEGKAWMFFGDQHFVTDFLYQTEWQNWLKDGVLTKMDVAFSRDTEEKVYVQHRMLEHSAELFEWLQEGAAVYICGDEKHMAHDVHNTLLEIIEKEGNMSREEAEAYLADMQQQKRYQRDVY

Atome Classification :

(73 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

FAD_A_2(1DDI)
CYSJ_ECOLI
[Raw transfer]




FAD_A_4(1DDG)
CYSJ_ECOLI
[Raw transfer]




FAD_B_5(1DDG)
CYSJ_ECOLI
[Raw transfer]




FAD_A_4(1DDG)
CYSJ_ECOLI
[Raw transfer]




FAD_B_5(3MHP)
FENR1_PEA
[Raw transfer]




FMN_A_2(1YKG)
CYSJ_ECOLI
[Raw transfer]




FAD_F_6(1QGA)
FENR1_PEA
[Raw transfer]




FAD_B_4(3VO1)
?
[Raw transfer]




FAD_A_3(3VO2)
?
[Raw transfer]




FAD_B_4(3VO2)
?
[Raw transfer]




FAD_B_4(4AF7)
FENR1_PEA
[Raw transfer]




FDA_A_3(1FNC)
FENR_SPIOL
[Raw transfer]




FAD_D_4(1QGA)
FENR1_PEA
[Raw transfer]




FAD_A_3(1FND)
FENR_SPIOL
[Raw transfer]




FAD_F_6(1QFY)
FENR1_PEA
[Raw transfer]




FAD_A_4(3MHP)
FENR1_PEA
[Raw transfer]




FAD_C_3(1QG0)
FENR1_PEA
[Raw transfer]




FAD_F_6(1QFZ)
FENR1_PEA
[Raw transfer]




FAD_D_4(1QFZ)
FENR1_PEA
[Raw transfer]




FAD_D_4(1QG0)
FENR1_PEA
[Raw transfer]




FAD_F_6(1SM4)
?
[Raw transfer]




FAD_D_4(1QFY)
FENR1_PEA
[Raw transfer]




FAD_E_5(1SM4)
?
[Raw transfer]




FAD_D_4(1FNB)
FENR_SPIOL
[Raw transfer]




FAD_D_4(1GAW)
?
[Raw transfer]




FAD_A_5(3W5V)
?
[Raw transfer]




FAD_A_4(1GAQ)
?
[Raw transfer]




FAD_A_3(3VO1)
?
[Raw transfer]




FAD_D_4(1FRN)
FENR_SPIOL
[Raw transfer]




FAD_D_4(1BX1)
FENR_SPIOL
[Raw transfer]




FAD_A_3(4AF6)
FENR1_PEA
[Raw transfer]




FAD_D_4(1FRQ)
FENR_SPIOL
[Raw transfer]




FAD_C_3(1GAW)
?
[Raw transfer]




FAD_B_4(4AF6)
FENR1_PEA
[Raw transfer]




FAD_D_4(1BX0)
FENR_SPIOL
[Raw transfer]




FAD_C_7(3W5V)
?
[Raw transfer]




FAD_A_3(2XNC)
FENR1_PEA
[Raw transfer]




NAP_A_3(3QFS)
NCPR_HUMAN
[Raw transfer]




NAP_A_3(3QFS)
NCPR_HUMAN
[Raw transfer]




FAD_A_3(4AF7)
FENR1_PEA
[Raw transfer]




FAD_A_2(3LO8)
?
[Raw transfer]




NAP_A_5(3QFC)
NCPR_HUMAN
[Raw transfer]




NAP_A_4(4DQL)
CPXB_BACME
[Raw transfer]




FAD_A_2(3LVB)
?
[Raw transfer]




NAP_C_3(1F20)

[Raw transfer]




NAP_C_3(1F20)

[Raw transfer]




NAP_A_4(4DQL)
CPXB_BACME
[Raw transfer]




NAP_C_3(1F20)

[Raw transfer]




NAP_A_3(3QFT)
NCPR_HUMAN
[Raw transfer]




FAD_A_2(1JB9)
?
[Raw transfer]




FAD_C_6(1GAQ)
?
[Raw transfer]




FAD_B_7(2XNC)
FENR1_PEA
[Raw transfer]




NAP_B_9(4DQL)

[Raw transfer]




GOL_F_6(1F20)

[Raw transfer]




GOL_D_4(1F20)

[Raw transfer]




100 Fugue 80.2032% 39 - C2 -1JA1 - NCPR_RAT -
5 PsiBlast_PDB 79.9031% 39 - C2 -3FJO - NCPR_HUMAN (first) -
110 HHSearch 79.8231% 17 - C2 -1TLL - NOS1_RAT -
109 HHSearch 79.6532% 34 - C2 -3QE2 - NCPR_HUMAN -
31 PsiBlast_CBE 79.4731% 37 - C2 -1JA1 - NCPR_RAT -
16 PsiBlast_PDB 79.3731% 38 - C2 -1JA1 - NCPR_RAT -
18 PsiBlast_PDB 79.3031% 34 - C2 -4YAU - ? -
9 PsiBlast_PDB 79.0431% 47 - C2 -3OJW - NCPR_RAT -
11 PsiBlast_PDB 78.9831% 34 - C2 -3QE2 - NCPR_HUMAN -
10 PsiBlast_PDB 78.9531% 44 - C2 -3OJX - NCPR_RAT -
17 PsiBlast_PDB 78.9231% 39 - C2 -4Y7C - ? -
32 PsiBlast_CBE 78.9031% 36 - C2 -4YAU - ? -
19 PsiBlast_PDB 78.7331% 41 - C2 -4Y9U - ? -
27 PsiBlast_CBE 78.5931% 52 - C2 -3QE2 - NCPR_HUMAN -
33 PsiBlast_CBE 78.5131% 35 - C2 -4Y7C - ? -
28 PsiBlast_CBE 78.4731% 45 - C2 -3QFR - NCPR_HUMAN -
25 PsiBlast_CBE 78.2731% 46 - C2 -1J9Z - NCPR_RAT -
20 PsiBlast_PDB 78.1431% 40 - C2 -4YAO - ? -
23 PsiBlast_CBE 77.9731% 46 - C2 -4YAL - ? -
14 PsiBlast_PDB 77.9331% 38 - C2 -4YAW - ? -
15 PsiBlast_PDB 77.3331% 47 - C2 -3QFC 7.6 NCPR_HUMAN
1 PsiBlast_PDB 76.1946%-105 - C2 -1DDG 11.4 CYSJ_ECOLI
21 PsiBlast_CBE 75.6446%-100 - C2 -1DDG 12.2 CYSJ_ECOLI
113 HHSearch 75.5146% -94 - C2 -1DDG 11.4 CYSJ_ECOLI
2 PsiBlast_PDB 75.1546%-100 - C2 -1DDI 12.3 CYSJ_ECOLI
112 HHSearch 68.6934% -1 - C2 -3QFS 7.2 NCPR_HUMAN
36 PsiBlast_CBE 68.5533% -11 - C2 -3QFS 7.2 NCPR_HUMAN
37 PsiBlast_CBE 67.5933% -11 - C2 -3QFT 7.6 NCPR_HUMAN
115 HHSearch 63.2535% 40 - C2 -4DQL 6.0 CPXB_BACME
101 Fugue 62.5530% 35 - C2 -1F20 6.9
116 HHSearch 62.4031% 44 - C2 -1F20 7.0
41 PsiBlast_CBE 62.1931% 46 - C2 -1F20 7.0
40 PsiBlast_CBE 61.1633% 44 - C2 -4DQL 6.0 CPXB_BACME
39 PsiBlast_CBE 59.6533% 43 - C2 -4DQL 5.7
42 PsiBlast_CBE 46.7645%-111 - C2 -1YKG 8.2 CYSJ_ECOLI
65 PsiBlast_CBE 41.4434% 23 - C2 -4AF6 10.1 FENR1_PEA
58 PsiBlast_CBE 41.3633% 24 - C2 -3LVB 11.9 ?
74 PsiBlast_CBE 41.3033% 20 - C2 -1FND 10.6 FENR_SPIOL
57 PsiBlast_CBE 40.7833% 21 - C2 -1JB9 11.9 ?
75 PsiBlast_CBE 40.5233% 20 - C2 -1FNC 10.4 FENR_SPIOL
84 PsiBlast_CBE 40.4632% 11 - C2 -1FRN 9.8 FENR_SPIOL
64 PsiBlast_CBE 40.2634% 25 - C2 -4AF6 9.3 FENR1_PEA
63 PsiBlast_CBE 40.1234% 26 - C2 -1QFY 10.5 FENR1_PEA
71 PsiBlast_CBE 40.0934% 26 - C2 -1QGA 10.6 FENR1_PEA
67 PsiBlast_CBE 40.0134% 23 - C2 -3MHP 9.5 FENR1_PEA
43 PsiBlast_CBE 40.0035% 32 - C2 -3VO1 10.8 ?
50 PsiBlast_CBE 39.9734% 30 - C2 -3W5V 9.2 ?
44 PsiBlast_CBE 39.9635% 30 - C2 -3VO1 10.1 ?
79 PsiBlast_CBE 39.9233% 24 - C2 -4AF7 8.6 FENR1_PEA
76 PsiBlast_CBE 39.8633% 20 - C2 -1FNB 10.5 FENR_SPIOL
61 PsiBlast_CBE 39.7634% 28 - C2 -1QFZ 10.3 FENR1_PEA
83 PsiBlast_CBE 39.7233% 22 - C2 -1BX1 10.5 FENR_SPIOL
68 PsiBlast_CBE 39.5634% 24 - C2 -1QG0 10.2 FENR1_PEA
46 PsiBlast_CBE 39.4334% 33 - C2 -1GAW 10.1 ?
66 PsiBlast_CBE 39.3734% 26 - C2 -3MHP 10.6 FENR1_PEA
47 PsiBlast_CBE 39.2934% 26 - C2 -1GAQ 9.1 ?
77 PsiBlast_CBE 39.2733% 39 - C2 -2XNC 7.7 FENR1_PEA
81 PsiBlast_CBE 39.2233% 19 - C2 -1FRQ 10.2 FENR_SPIOL
72 PsiBlast_CBE 39.1833% 24 - C2 -1SM4 7.5 ?
69 PsiBlast_CBE 39.1234% 24 - C2 -1QG0 10.9 FENR1_PEA
59 PsiBlast_CBE 38.9933% 22 - C2 -3LO8 11.8 ?
49 PsiBlast_CBE 38.8034% 27 - C2 -3W5V 8.8 ?
82 PsiBlast_CBE 38.7333% 22 - C2 -1BX0 10.5 FENR_SPIOL
80 PsiBlast_CBE 38.5033% 27 - C2 -4AF7 9.4 FENR1_PEA
56 PsiBlast_CBE 38.4534% 23 - C2 -3VO2 10.6 ?
73 PsiBlast_CBE 38.4333% 22 - C2 -1SM4 9.5 ?
60 PsiBlast_CBE 38.2834% 30 - C2 -1QFZ 10.4 FENR1_PEA
48 PsiBlast_CBE 38.2434% 30 - C2 -1GAQ 10.0 ?
55 PsiBlast_CBE 38.2034% 25 - C2 -3VO2 10.9 ?
45 PsiBlast_CBE 38.0734% 33 - C2 -1GAW 10.7 ?
70 PsiBlast_CBE 37.8334% 27 - C2 -1QGA 10.2 FENR1_PEA
62 PsiBlast_CBE 37.8234% 30 - C2 -1QFY 10.5 FENR1_PEA
78 PsiBlast_CBE 37.6733% 40 - C2 -2XNC 8.2 FENR1_PEA