@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : bsu33730: (2016-07-26 )
MLTLENVSKTYKGGKKAVNNVNLKIAKGEFICFIGPSGCGKTTTMKMINRLIEPSAGKIFIDGENIMDQDPVELRRKIGYVIQQIGLFPHMTIQQNISLVPKLLKWPEQQRKERARELLKLVDMGPEYVDRYPHELSGGQQQRIGVLRALAAEPPLILMDEPFGALDPITRDSLQEEFKKLQKTLHKTIVFVTHDMDEAIKLADRIVILKAGEIVQVGTPDDILRNPADEFVEEFIGKERLIQSSSPDVERVDQIMNTQPVTITADKTLSEAIQLMRQERVDSLLVVNDERVLQGYVDVEIIDQCRKKANLVSEVLHEDIYTVLGGTLLRDTVRKILKRGVKYVPVVDEDRRLIGIVTRASLVDIVYDSLWGEEKQLAALS

Atome Classification :

(35 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

ATP_J_5(4YMU)
?
[Raw transfer]




ANP_K_6(3C41)
?
[Raw transfer]




ATP_A_7(4YMU)
?
[Raw transfer]




ANP_J_5(3C41)
?
[Raw transfer]




ATP_B_9(4P33)
LPTB_ECOLI
[Raw transfer]




ATP_A_6(4YMV)
?
[Raw transfer]




ATP_A_5(1B0U)
HISP_SALTY
[Raw transfer]




ATP_B_5(4QC2)
?
[Raw transfer]




ADP_A_3(4YER)
?
[Raw transfer]




ADP_B_5(4P32)
LPTB_ECOLI
[Raw transfer]




ATP_A_3(4QC2)
?
[Raw transfer]




ADP_A_3(4P32)
LPTB_ECOLI
[Raw transfer]




AT4_B_6(2OLK)
?
[Raw transfer]




AT4_D_8(2OLK)
?
[Raw transfer]




GOL_B_11(4P33)
LPTB_ECOLI
[Raw transfer]




104 HHSearch 88.1539%-130 - C2 -1Z47 - ? -
109 HHSearch 87.1539%-140 - C2 -3RLF - MALK_ECOLI -
106 HHSearch 85.2241%-138 - C2 -1V43 - ? -
21 PsiBlast_CBE 84.6742%-131 - C2 -2IT1 - ? -
105 HHSearch 84.4443%-127 - C2 -2IT1 - ? -
2 PsiBlast_PDB 83.8941%-137 - C2 -1V43 - ? -
1 PsiBlast_PDB 83.8742%-129 - C2 -2IT1 - ? -
3 PsiBlast_PDB 82.2241%-132 - C2 -1VCI - ? -
111 HHSearch 82.1138%-132 - C2 -2YYZ - ? -
103 HHSearch 81.0239%-141 * C2 *4TQU - ? -
25 PsiBlast_CBE 80.9839% -65 - C2 -3PUZ - MALK_ECOLI -
10 PsiBlast_PDB 80.5539% -64 - C2 -3PUY - MALK_ECOLI -
11 PsiBlast_PDB 80.1339% -68 - C2 -3PUZ - MALK_ECOLI -
15 PsiBlast_PDB 79.5839% -63 - C2 -3PUX - MALK_ECOLI -
19 PsiBlast_PDB 79.1939% -62 - C2 -4KI0 - MALK_ECOLI -
13 PsiBlast_PDB 78.9339% -65 - C2 -3PUV - MALK_ECOLI -
16 PsiBlast_PDB 78.8739% -65 - C2 -3RLF - MALK_ECOLI -
14 PsiBlast_PDB 78.7939% -64 - C2 -3PUW - MALK_ECOLI -
18 PsiBlast_PDB 78.6739% -65 - C2 -4KHZ - ? -
12 PsiBlast_PDB 78.6339% -64 - C2 -3PV0 - MALK_ECOLI -
114 HHSearch 75.4937%-126 - C2 -4YER 6.6 ?
64 PsiBlast_CBE 74.7639% -41 - C2 -4YMV 5.9 ?
65 PsiBlast_CBE 74.4839% -36 - C2 -4YMU 5.5 ?
66 PsiBlast_CBE 73.9939% -35 - C2 -4YMU 5.8 ?
67 PsiBlast_CBE 72.1537% -33 - C2 -3C41 6.6 ?
79 PsiBlast_CBE 71.5837% -34 - C2 -2OLK 6.0 ?
77 PsiBlast_CBE 71.3537% -31 - C2 -2OLK 6.1 ?
68 PsiBlast_CBE 71.3437% -33 - C2 -3C41 7.5 ?
89 PsiBlast_CBE 67.3034% -18 - C2 -1B0U 5.8 HISP_SALTY
98 PsiBlast_CBE 61.7032% -26 - C2 -4P33 6.6 LPTB_ECOLI
99 PsiBlast_CBE 61.5332% -23 - C2 -4P33 2.5 LPTB_ECOLI
95 PsiBlast_CBE 60.9532% -21 - C2 -4QC2 7.2 ?
94 PsiBlast_CBE 59.9432% -18 - C2 -4QC2 7.8 ?
96 PsiBlast_CBE 59.1432% -29 - C2 -4P32 6.2 LPTB_ECOLI
97 PsiBlast_CBE 58.9432% -25 - C2 -4P32 5.9 LPTB_ECOLI