@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : bsu33830: (2016-07-26 )
MLKLEQVSKVYKGGKKAVNSIDLDIAKGEFICFIGPSGCGKTTTMKMINRLIEPSSGRIFIDGENIMEQDPVELRRKIGYVIQQIGLFPHMTIQQNISLVPKLLKWPEEKRKERARELLKLVDMGPEYLDRYPHELSGGQQQRIGVLRALAAEPPLILMDEPFGALDPITRDSLQEEFKKLQRTLNKTIVFVTHDMDEAIKLADRIVILKAGEIVQVGTPDEILRNPANEFVEEFIGKERLIQSRPDIERVEQMMNRTPVTVSADKTLSQAIQLMREKRVDSLLVVDRQNVLKGYVDVEMIDQNRKKASIVGDVYRSDIYTVQKGALLRDTVRKILKQGIKYVPVVDEQNHLAGIVTRASLVDIVYDSIWGDEENQLMTI

Atome Classification :

(36 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

ANP_K_6(3C41)
?
[Raw transfer]




ANP_J_5(3C41)
?
[Raw transfer]




ATP_B_5(4QC2)
?
[Raw transfer]




ATP_B_9(4P33)
LPTB_ECOLI
[Raw transfer]




ADP_A_3(4YER)
?
[Raw transfer]




ATP_A_3(4QC2)
?
[Raw transfer]




ADP_B_5(4P32)
LPTB_ECOLI
[Raw transfer]




ATP_A_5(1L2T)
Y796_METJA
[Raw transfer]




ATP_B_6(1L2T)
Y796_METJA
[Raw transfer]




ADP_A_3(3TIF)
Y796_METJA
[Raw transfer]




ADP_A_3(4P32)
LPTB_ECOLI
[Raw transfer]




AT4_B_6(2OLK)
?
[Raw transfer]




ADP_B_8(3TIF)
Y796_METJA
[Raw transfer]




ATP_A_5(1B0U)
HISP_SALTY
[Raw transfer]




AT4_D_8(2OLK)
?
[Raw transfer]




GOL_B_11(4P33)
LPTB_ECOLI
[Raw transfer]




114 HHSearch 82.7339%-131 - C1 -1Z47 - ? -
119 HHSearch 82.4039%-140 - C1 -3RLF - MALK_ECOLI -
21 PsiBlast_CBE 80.3735%-103 - C1 -2IT1 - ? -
4 PsiBlast_PDB 80.0838%-123 - C1 -1Z47 - ? -
1 PsiBlast_PDB 79.7535%-101 - C1 -2IT1 - ? -
116 HHSearch 79.2143%-127 - C1 -2IT1 - ? -
2 PsiBlast_PDB 78.2742%-139 - C1 -1V43 - ? -
115 HHSearch 77.7842%-137 - C1 -1V43 - ? -
22 PsiBlast_CBE 77.6038%-120 - C1 -1Z47 - ? -
3 PsiBlast_PDB 77.2042%-134 - C1 -1VCI - ? -
113 HHSearch 74.7138%-140 * C1 *4TQU - ? -
121 HHSearch 74.4239%-132 - C1 -2YYZ - ? -
13 PsiBlast_PDB 72.7136% -18 - C1 -3PUV - MALK_ECOLI -
19 PsiBlast_PDB 71.7436% -15 - C1 -4KI0 - MALK_ECOLI -
10 PsiBlast_PDB 71.5136% -13 - C1 -3PUY - MALK_ECOLI -
15 PsiBlast_PDB 71.5036% -17 - C1 -3PUX - MALK_ECOLI -
25 PsiBlast_CBE 71.1536% -16 - C1 -3PUZ - MALK_ECOLI -
14 PsiBlast_PDB 70.4536% -12 - C1 -3PUW - MALK_ECOLI -
16 PsiBlast_PDB 70.1536% -11 - C1 -3RLF - MALK_ECOLI -
11 PsiBlast_PDB 70.0636% -15 - C1 -3PUZ - MALK_ECOLI -
124 HHSearch 68.5337%-127 - C1 -4YER 6.6 ?
64 PsiBlast_CBE 68.0338% -33 - C1 -3C41 6.6 ?
65 PsiBlast_CBE 66.3138% -33 - C1 -3C41 7.5 ?
74 PsiBlast_CBE 65.7938% -30 - C1 -2OLK 6.1 ?
76 PsiBlast_CBE 65.6738% -34 - C1 -2OLK 6.0 ?
95 PsiBlast_CBE 60.2633% -20 - C1 -1B0U 4.0 HISP_SALTY
96 PsiBlast_CBE 55.1632% -45 - C1 -4P32 6.3 LPTB_ECOLI
101 PsiBlast_CBE 54.8132% -42 - C1 -4P33 2.5 LPTB_ECOLI
99 PsiBlast_CBE 53.9932% -39 - C1 -4QC2 7.2 ?
98 PsiBlast_CBE 53.8432% -38 - C1 -4QC2 7.8 ?
100 PsiBlast_CBE 53.0632% -41 - C1 -4P33 6.6 LPTB_ECOLI
97 PsiBlast_CBE 52.9032% -39 - C1 -4P32 5.8 LPTB_ECOLI
50 PsiBlast_CBE 52.0740% 37 - C1 -1L2T 6.7 Y796_METJA
51 PsiBlast_CBE 52.0240% 37 - C1 -1L2T 6.5 Y796_METJA
60 PsiBlast_CBE 51.3540% 37 - C1 -3TIF 6.4 Y796_METJA
61 PsiBlast_CBE 49.9140% 37 - C1 -3TIF 6.0 Y796_METJA