@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : bsu33930: (2016-07-27 )
MNKKTLKDIDVKGKVVFCRVDFNVPMKDGEVTDDTRIRAALPTIKHLADQGAKVLLASHLGRPKGEVVEELRLTPVAARLGELLGKEVKKADEAYGDAVKAQISEMKDGDVLVLENVRFYPGEEKNDPELAKAFAELADVYVNDAFGAAHRAHASTAGIAEHLPAVAGFLMEKELDVLGKAVSNPDRPFTAIIGGAKVKDKIGVIESLLDKVDNLIIGGGLAYTFVKALGYEVGKSLLEEDKIELAKSFMDRAKEKGVNFYMPEDVLVADDFSNDANVKIVPISEIPSDLEAIDIGTKTRETYADVIKNSKLVVWNGPMGVFEIDLFAQGTKAVAEALAEAKDTYSVIGGGDSAAAVEKFGLADKMSHISTGGGASLEFMEGKELPGVAALNDK

Atome Classification :

(61 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

ADP_A_5(2WZD)
PGK1_HUMAN
[Raw transfer]




ADP_A_4(4AXX)
PGK1_HUMAN
[Raw transfer]




ANP_A_3(1VPE)
PGKT_THEMA
[Raw transfer]




ADP_A_4(2X13)
PGK1_HUMAN
[Raw transfer]




ATP_A_3(1VJD)
PGK1_PIG
[Raw transfer]




ADP_A_3(2XE7)
PGK1_HUMAN
[Raw transfer]




ANP_A_3(1VPE)
PGKT_THEMA
[Raw transfer]




ADP_A_3(2X15)
PGK1_HUMAN
[Raw transfer]




ADP_A_4(2WZB)
PGK1_HUMAN
[Raw transfer]




ADP_A_5(2WZC)
PGK1_HUMAN
[Raw transfer]




ANP_A_4(3ZLB)
PGK_STRP2
[Raw transfer]




ANP_A_4(3ZLB)
PGK_STRP2
[Raw transfer]




ADP_A_4(2WZB)
PGK1_HUMAN
[Raw transfer]




ADP_A_6(3ZOZ)
PGK1_HUMAN
[Raw transfer]




ADP_A_3(1PHP)
PGK_GEOSE
[Raw transfer]




BIS_A_2(16PK)
PGKC_TRYBB
[Raw transfer]




BIS_A_2(16PK)
PGKC_TRYBB
[Raw transfer]




ACP_A_4(2X14)
PGK1_HUMAN
[Raw transfer]




ATP_A_3(2PAA)
PGK2_MOUSE
[Raw transfer]




ADP_C_9(4NG4)
PGK_COXBU
[Raw transfer]




MAP_A_2(1QPG)
PGK_YEAST
[Raw transfer]




MAP_A_2(1QPG)
PGK_YEAST
[Raw transfer]




ADP_B_7(4NG4)
PGK_COXBU
[Raw transfer]




ADP_A_5(4NG4)
PGK_COXBU
[Raw transfer]




ADP_A_5(4NG4)
PGK_COXBU
[Raw transfer]




LA8_A_4(2YBE)
PGK1_HUMAN
[Raw transfer]




ATP_A_3(1VJC)
PGK1_PIG
[Raw transfer]




LA8_D_8(2Y3I)
PGK1_HUMAN
[Raw transfer]




LA8_A_5(2Y3I)
PGK1_HUMAN
[Raw transfer]




ADP_A_2(4FEY)
PGK_FRATT
[Raw transfer]




ADP_A_2(4FEY)
PGK_FRATT
[Raw transfer]




ACP_A_4(1KF0)
PGK1_PIG
[Raw transfer]




ADP_A_2(2ZGV)
PGK1_HUMAN
[Raw transfer]




ACP_A_3(2XE8)
PGK1_HUMAN
[Raw transfer]




AMP_A_2(1HDI)
PGK1_PIG
[Raw transfer]




CDP_A_5(3C3C)
PGK1_HUMAN
[Raw transfer]




ADP_B_6(3C3A)
PGK1_HUMAN
[Raw transfer]




FMT_A_5(3Q3V)
PGK_CAMJE
[Raw transfer]




FMT_A_5(3Q3V)
PGK_CAMJE
[Raw transfer]




GOL_E_5(1FW8)
PGK_YEAST
[Raw transfer]




GOL_E_5(1FW8)
PGK_YEAST
[Raw transfer]




GOL_E_5(1FW8)
PGK_YEAST
[Raw transfer]




3PG_A_4(1VPE)
PGKT_THEMA
[Raw transfer]




CDF_B_5(3C3B)
PGK1_HUMAN
[Raw transfer]




3PG_A_2(2P9T)
PGK2_MOUSE
[Raw transfer]




3PG_B_4(3C39)
PGK1_HUMAN
[Raw transfer]




3PG_A_2(2XE6)
PGK1_HUMAN
[Raw transfer]




3PG_A_3(3C39)
PGK1_HUMAN
[Raw transfer]




3PG_A_5(2CUN)
PGK_PYRHO
[Raw transfer]




3PG_B_6(3C3C)
PGK1_HUMAN
[Raw transfer]




3PG_A_4(3C3A)
PGK1_HUMAN
[Raw transfer]




3PG_A_5(2CUN)
PGK_PYRHO
[Raw transfer]




3PG_B_6(2CUN)
PGK_PYRHO
[Raw transfer]




3PG_B_4(2PAA)
PGK2_MOUSE
[Raw transfer]




TZN_A_2(4O33)
PGK1_HUMAN
[Raw transfer]




TZN_A_2(4O3F)
PGK1_MOUSE
[Raw transfer]




61 HHSearch 92.6381%-105 - C5 -1PHP 7.6 PGK_GEOSE
1 PsiBlast_PDB 92.3780%-105 - C5 -1PHP - PGK_GEOSE -
2 PsiBlast_PDB 80.8760% -63 - C5 -1VPE 8.2 PGKT_THEMA
63 HHSearch 80.6360% -63 - C5 -1VPE 8.2 PGKT_THEMA
64 HHSearch 69.7449% -9 * C5 *3Q3V 3.1 PGK_CAMJE
11 PsiBlast_PDB 68.7948% -9 - C5 -3Q3V 3.1 PGK_CAMJE
62 HHSearch 68.2251% -20 - C5 -1V6S - PGK_THET8 -
4 PsiBlast_PDB 68.2050% -29 - C5 -1V6S - PGK_THET8 -
21 PsiBlast_CBE 68.1650% -29 - C5 -1V6S - PGK_THET8 -
5 PsiBlast_PDB 67.6150% -30 - C5 -2IE8 - ? -
13 PsiBlast_PDB 67.0447% 20 - C5 -2P9T 4.9 PGK2_MOUSE
14 PsiBlast_PDB 66.8047% 20 - C5 -2PAA 5.8 PGK2_MOUSE
68 HHSearch 66.0650% 3 - C5 -3ZLB 7.6 PGK_STRP2
51 PsiBlast_CBE 65.5846% 22 - C5 -4O33 5.5 PGK1_HUMAN
69 HHSearch 65.5448% 17 - C5 -16PK 6.9 PGKC_TRYBB
49 PsiBlast_CBE 65.5346% 18 - C5 -2XE6 5.7 PGK1_HUMAN
8 PsiBlast_PDB 65.5249% 7 - C5 -3ZLB 7.6 PGK_STRP2
42 PsiBlast_CBE 65.4946% 7 - C5 -3C39 5.3 PGK1_HUMAN
25 PsiBlast_CBE 65.2845% 20 - C5 -13PK - PGKC_TRYBB -
19 PsiBlast_PDB 65.2845% 21 - C5 -16PK 6.9 PGKC_TRYBB
31 PsiBlast_CBE 65.0646% 12 - C5 -2X15 7.7 PGK1_HUMAN
44 PsiBlast_CBE 65.0446% 12 - C5 -4AXX 7.6 PGK1_HUMAN
32 PsiBlast_CBE 65.0446% 13 - C5 -2X13 6.9 PGK1_HUMAN
48 PsiBlast_CBE 64.5746% 22 - C5 -2XE7 6.2 PGK1_HUMAN
36 PsiBlast_CBE 64.5746% 24 - C5 -3C3C 4.2 PGK1_HUMAN
47 PsiBlast_CBE 64.5246% 21 - C5 -2XE8 4.1 PGK1_HUMAN
70 HHSearch 64.4848% 19 - C5 -2WZB 8.2 PGK1_HUMAN
73 HHSearch 64.4349% 22 - C5 -1QPG 8.3 PGK_YEAST
46 PsiBlast_CBE 64.3746% 22 - C5 -2YBE 7.8 PGK1_HUMAN
17 PsiBlast_PDB 64.3446% 25 - C5 -1VJD 5.8 PGK1_PIG
40 PsiBlast_CBE 64.1646% 21 - C5 -3C3A 3.7 PGK1_HUMAN
57 PsiBlast_CBE 64.1445% 16 - C5 -1HDI 5.7 PGK1_PIG
37 PsiBlast_CBE 64.1246% 23 - C5 -3C3B 3.9 PGK1_HUMAN
6 PsiBlast_PDB 64.0548% 15 - C5 -4FEY 5.7 PGK_FRATT
10 PsiBlast_PDB 63.9846% 6 - C5 -4NG4 6.0 PGK_COXBU
50 PsiBlast_CBE 63.9746% 21 - C5 -1KF0 5.1 PGK1_PIG
28 PsiBlast_CBE 63.9546% 24 - C5 -4O3F 5.2 PGK1_MOUSE
65 HHSearch 63.9349% 14 - C5 -4FEY 5.7 PGK_FRATT
41 PsiBlast_CBE 63.9346% 21 - C5 -3C39 5.5 PGK1_HUMAN
33 PsiBlast_CBE 63.9346% 30 - C5 -2WZC 8.0 PGK1_HUMAN
24 PsiBlast_CBE 63.8947% 27 - C5 -2PAA 3.7 PGK2_MOUSE
45 PsiBlast_CBE 63.8446% 31 - C5 -3ZOZ 7.7 PGK1_HUMAN
43 PsiBlast_CBE 63.8346% 27 - C5 -2ZGV 5.2 PGK1_HUMAN
34 PsiBlast_CBE 63.7046% 27 - C5 -2WZB 8.2 PGK1_HUMAN
23 PsiBlast_CBE 63.5846% 6 - C5 -4NG4 6.4 PGK_COXBU
22 PsiBlast_CBE 63.3746% 6 - C5 -4NG4 6.6 PGK_COXBU
66 HHSearch 63.2746% 8 - C5 -4NG4 6.0 PGK_COXBU
30 PsiBlast_CBE 63.2146% 26 - C5 -2Y3I 6.6 PGK1_HUMAN
9 PsiBlast_PDB 63.1847% 25 - C5 -1QPG 8.3 PGK_YEAST
35 PsiBlast_CBE 63.1346% 26 - C5 -3C3C 4.7 PGK1_HUMAN
54 PsiBlast_CBE 63.1246% 29 - C5 -2X14 8.3 PGK1_HUMAN
55 PsiBlast_CBE 62.8746% 29 - C5 -2WZD 6.9 PGK1_HUMAN
16 PsiBlast_PDB 62.8746% 26 - C5 -1VJC 5.7 PGK1_PIG
39 PsiBlast_CBE 62.6346% 22 - C5 -3C3A 5.2 PGK1_HUMAN
29 PsiBlast_CBE 62.1146% 27 - C5 -2Y3I 6.7 PGK1_HUMAN
75 HHSearch 61.4138% -35 - C5 -2CUN 2.4 PGK_PYRHO
60 PsiBlast_CBE 60.7238% 4 - C5 -2CUN 2.4 PGK_PYRHO
59 PsiBlast_CBE 60.0038% 7 - C5 -2CUN 2.8 PGK_PYRHO
76 HHSearch 51.5148% 39 - C5 -1FW8 2.7 PGK_YEAST
58 PsiBlast_CBE 50.0247% 40 - C5 -1FW8 2.7 PGK_YEAST
77 HHSearch 39.0655%-186 - C5 -1FW8 2.9 PGK_YEAST