@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : bsu33950: (2016-07-27 )
MNQLIQAQKKLLPDLLLVMQKRFEILQYIRLTEPIGRRSLSASLGISERVLRGEVQFLKEQNLVDIKTNGMTLTEEGYELLSVLEDTMKDVLGLTLLEKTLKERLNLKDAIIVSGDSDQSPWVKKEMGRAAVACMKKRFSGKNIVAVTGGTTIEAVAEMMTPDSKNRELLFVPARGGLGEDVKNQANTICAHMAEKASGTYRLLFVPGQLSQGAYSSIIEEPSVKEVLNTIKSASMLVHGIGEAKTMAQRRNTPLEDLKKIDDNDAVTEAFGYYFNADGEVVHKVHSVGMQLDDIDAIPDIIAVAGGSSKAEAIEAYFKKPRNTVLVTDEGAAKKLLRDE

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

F6P_B_4(3BXH)
CGGR_BACSU
[Raw transfer]




F6P_A_3(3BXH)
CGGR_BACSU
[Raw transfer]




FBP_A_3(3BXF)
CGGR_BACSU
[Raw transfer]




BG6_A_3(3BXG)
CGGR_BACSU
[Raw transfer]




BG6_B_4(3BXG)
CGGR_BACSU
[Raw transfer]




13P_B_8(3BXF)
CGGR_BACSU
[Raw transfer]




13P_A_3(3BXE)
CGGR_BACSU
[Raw transfer]




G3H_B_6(2OKG)
CGGR_BACSU
[Raw transfer]




13P_B_4(3BXE)
CGGR_BACSU
[Raw transfer]




1 PsiBlast_PDB 92.62100% -98 - C3 -3BXE 3.6 CGGR_BACSU
21 PsiBlast_CBE 92.58100% -96 - C3 -3BXH 5.7 CGGR_BACSU
23 PsiBlast_CBE 92.19100%-101 - C3 -3BXF 4.0 CGGR_BACSU
2 PsiBlast_PDB 92.18100%-104 - C3 -3BXF 5.8 CGGR_BACSU
3 PsiBlast_PDB 91.91100% -95 - C3 -3BXG 5.1 CGGR_BACSU
5 PsiBlast_PDB 91.7996%-102 - C3 -2OKG - CGGR_BACSU -
4 PsiBlast_PDB 91.63100% -98 - C3 -3BXH 5.4 CGGR_BACSU
22 PsiBlast_CBE 91.41100% -98 - C3 -3BXG 5.4 CGGR_BACSU
24 PsiBlast_CBE 91.17100% -97 - C3 -3BXE 3.9 CGGR_BACSU
25 PsiBlast_CBE 89.6596% -91 - C3 -2OKG 3.6 CGGR_BACSU
47 HHSearch 84.1396% -48 - C3 -2OKG - CGGR_BACSU -
6 PsiBlast_PDB 65.8643% 14 - C3 -2O0M - ? -
29 Fugue 63.5118% -61 - C3 -2W48 - SORC_KLEPN -
38 HHSearch 63.3419% -59 * C3 *2W48 - SORC_KLEPN -
37 HHSearch 61.7943% 21 - C3 -2O0M - ? -
8 PsiBlast_PDB 58.9026% -40 - C3 -3KV1 - ? -
39 HHSearch 58.2422% -55 - C3 -4L5J - LSRR_ECOLI -
43 HHSearch 58.0525% -28 - C3 -3KV1 - ? -
42 HHSearch 56.8820% -39 - C3 -3EFB - ? -
13 PsiBlast_PDB 55.2924% -53 - C3 -4L4Z - LSRR_ECOLI -