@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : bsu34100: (2016-07-27 )
MNEAILSRNHVKVKGSGKASIMFAPGFGCDQSVWNAVAPAFEEDHRVILFDYVGSGHSDLRAYDLNRYQTLDGYAQDVLDVCEALDLKETVFVGHSVGALIGMLASIRRPELFSHLVMVGPSPCYLNDPPEYYGGFEEEQLLGLLEMMEKNYIGWATVFAATVLNQPDRPEIKEELESRFCSTDPVIARQFAKAAFFSDHREDLSKVTVPSLILQCADDIIAPATVGKYMHQHLPYSSLKQMEARGHCPHMSHPDETIQLIGDYLKAHV

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

PMS_B_4(1WPR)
RSBQ_BACSU
[Raw transfer]




PGO_B_5(1WOM)
RSBQ_BACSU
[Raw transfer]




PGO_A_4(1WOM)
RSBQ_BACSU
[Raw transfer]




GOL_A_3(4DNP)
DAD2_PETHY
[Raw transfer]




KKN_B_4(4JYM)
KAI2_ARATH
[Raw transfer]




28 HHSearch 97.1699%-137 - C1 -1WOM 2.1 RSBQ_BACSU
1 PsiBlast_PDB 97.1699%-137 - C1 -1WOM - RSBQ_BACSU -
22 PsiBlast_CBE 96.1299%-132 - C1 -1WOM 3.6 RSBQ_BACSU
2 PsiBlast_PDB 95.3899%-131 - C1 -1WPR - RSBQ_BACSU -
21 PsiBlast_CBE 93.8799%-130 - C1 -1WPR 3.8 RSBQ_BACSU
29 HHSearch 77.7942%-139 - C1 -3QVM - ? -
11 PsiBlast_PDB 75.9738%-136 - C1 -3W06 - KAI2_ARATH -
7 PsiBlast_PDB 75.8038%-133 - C1 -4HRX - KAI2_ARATH -
30 HHSearch 75.6439%-135 - C1 -3W06 - KAI2_ARATH -
5 PsiBlast_PDB 75.2538%-134 - C1 -4JYM - KAI2_ARATH -
32 HHSearch 75.1638%-147 * C1 *3W04 - D14_ORYSJ -
4 PsiBlast_PDB 75.0238%-134 - C1 -4IH1 - KAI2_ARATH -
23 PsiBlast_CBE 74.8638%-132 - C1 -4JYM 2.8 KAI2_ARATH
9 PsiBlast_PDB 74.6338%-135 - C1 -4HTA - KAI2_ARATH -
13 PsiBlast_PDB 73.3138%-151 - C1 -3W05 - D14_ORYSJ -
25 PsiBlast_CBE 73.2738%-153 - C1 -3W04 - D14_ORYSJ -
15 PsiBlast_PDB 73.1540%-143 - C1 -4DNP 3.6 DAD2_PETHY
17 PsiBlast_PDB 73.1138%-149 - C1 -4IH9 - D14_ORYSJ -
8 PsiBlast_PDB 72.9938%-135 - C1 -4HRY - KAI2_ARATH -
24 PsiBlast_CBE 72.6938%-150 - C1 -3W05 - D14_ORYSJ -