@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : bsu34880: (2016-07-29 )
MSAFTLYPAIDMRNGKCVRLVQGDYNKETIYGDSPYDMAELFEKEGAEWIHLVDLDGAKEGKRVNDRHVIEIAQKLNLKVEIGGGIRSENDVYEYLSAGVERVILGSSAVSNPPFVKKMLKQYGEKIAIGLDARNGFVSTEGWLETSTLKATELGKELANEGAEVFIFTDIATDGMLSGPNVKSTVELAKETGKSVIASGGVSSVADLEALARNEADGVSGAIIGKALYTNQFTLSEALERVKRK

Atome Classification :

(24 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

GUO_A_2(5A5W)
HIS4_SALTY
[Raw transfer]




GUO_A_2(5A5W)
HIS4_SALTY
[Raw transfer]




1PR_A_2(3ZS4)
HIS4_MYCTU
[Raw transfer]




2ER_A_2(2Y88)
HIS4_MYCTU
[Raw transfer]




2ER_A_2(2Y88)
HIS4_MYCTU
[Raw transfer]




GUO_A_2(5AHF)
HIS4_SALTY
[Raw transfer]




137_A_7(2Y85)
HIS4_MYCTU
[Raw transfer]




137_C_16(2Y85)
HIS4_MYCTU
[Raw transfer]




137_D_21(2Y85)
HIS4_MYCTU
[Raw transfer]




AMZ_A_3(4TX9)
?
[Raw transfer]




AMZ_A_5(5DN1)
HIS4_STRCO
[Raw transfer]




GUO_A_3(5AHI)
?
[Raw transfer]




TRS_A_5(4WD0)
HIS4_ARTAT
[Raw transfer]




6 PsiBlast_PDB 93.1942% -87 - C1 -4U28 - ? -
5 PsiBlast_PDB 91.7042% -78 - C1 -4TX9 6.4 ?
3 PsiBlast_PDB 91.6644% -80 - C1 -2VEP - HIS4_STRCO -
1 PsiBlast_PDB 91.4644% -76 - C1 -5DN1 5.5 HIS4_STRCO
2 PsiBlast_PDB 91.1844% -89 - C1 -2X30 - HIS4_STRCO -
45 HHSearch 89.6342% -71 - C1 -4U28 - ? -
8 PsiBlast_PDB 89.5141% -53 - C1 -3ZS4 7.8 HIS4_MYCTU
22 PsiBlast_CBE 88.8841% -60 - C1 -2Y85 3.7 HIS4_MYCTU
7 PsiBlast_PDB 88.4941% -56 - C1 -2Y85 5.0 HIS4_MYCTU
23 PsiBlast_CBE 88.3541% -59 - C1 -2Y85 5.1 HIS4_MYCTU
46 HHSearch 88.1741% -69 * C1 *4X2R - ? -
43 HHSearch 88.1641% -51 - C1 -2Y88 10.6 HIS4_MYCTU
10 PsiBlast_PDB 87.7440% -52 - C1 -2Y88 10.6 HIS4_MYCTU
4 PsiBlast_PDB 87.3140%-109 - C1 -4WD0 2.5 HIS4_ARTAT
24 PsiBlast_CBE 86.4743% -46 - C1 -4X9S - ? -
9 PsiBlast_PDB 86.4143% -48 - C1 -4W9T - ? -
11 PsiBlast_PDB 86.3540% -52 - C1 -2Y89 - HIS4_MYCTU -
21 PsiBlast_CBE 83.3342% -51 - C1 -4X2R - ? -
12 PsiBlast_PDB 83.1938% -52 - C1 -4AXK - HIS4_COREF -
47 HHSearch 82.5838% -52 - C1 -4AXK - HIS4_COREF -
44 HHSearch 80.3834% -34 - C1 -5A5W 8.9 HIS4_SALTY
17 PsiBlast_PDB 78.7534% -29 - C1 -5A5W 8.9 HIS4_SALTY
15 PsiBlast_PDB 73.3334% -34 - C1 -5AHI 2.7 ?
14 PsiBlast_PDB 73.1734% -45 - C1 -5AHF 6.2 HIS4_SALTY