@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : bsu34900: (2016-07-29 )
MRIKEHLKQLKPYQPGKPIEAVKSEYGLDKVVKLASNENPYGCSEAAKEALHHEIQQLALYPDGYSAALRTRLSKHLNVSETSLIFGNGSDEIIQIICRAFLNNKTNTITAAPTFPQYKHNAVIEGAEVREIALRPDGSHDLDAMLEAIDEQTQVVWICSPNNPTGTYTSEGELLAFLERVPSRVLVVLDEAYYEYVTAEDYPETVPLLSKYSNLMILRTFSKAYGLAALRVGYGIADENLIRQIEPAREPFNTSRLGQAAAIAALDDQAFIASCVEQNNAGLQQYYDFAKTHGLKCYPSQTNFVLIDFKRPADELFQALLEKGYIVRSGNALGFPTSLRITIGTKEQNEEILAILAEIL

Atome Classification :

(23 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

PMP_B_13(3CQ5)
HIS8_CORGL
[Raw transfer]




PMP_A_11(3CQ5)
HIS8_CORGL
[Raw transfer]




PMP_A_2(1FG7)
HIS8_ECOLI
[Raw transfer]




33P_C_3(1LC8)
COBD_SALTY
[Raw transfer]




PMP_C_15(3CQ5)
HIS8_CORGL
[Raw transfer]




PMP_B_5(1UU2)
HIS8_THEMA
[Raw transfer]




PMP_A_3(1UU2)
HIS8_THEMA
[Raw transfer]




PLP_A_5(1LKC)
COBD_SALTY
[Raw transfer]




PLP_A_3(1IJI)
HIS8_ECOLI
[Raw transfer]




HSA_E_5(1GEX)
HIS8_ECOLI
[Raw transfer]




144_C_14(3CQ5)
HIS8_CORGL
[Raw transfer]




144_A_10(3CQ5)
HIS8_CORGL
[Raw transfer]




51 HHSearch 98.3552% -67 - C1 -3FFH - HIS8_LISIN -
1 PsiBlast_PDB 93.7551% -45 - C1 -3FFH - HIS8_LISIN -
2 PsiBlast_PDB 77.5135% -48 - C1 -3GET - HIS8_CAMJE -
53 HHSearch 68.6637% 13 - C1 -3GET - HIS8_CAMJE -
3 PsiBlast_PDB 65.9829% -19 - C1 -4R2N - PATR_MYCTU -
4 PsiBlast_PDB 63.8429% -16 - C1 -4R5Z - PATR_MYCTU -
55 HHSearch 62.4731% -5 - C1 -4R5Z - PATR_MYCTU -
19 PsiBlast_PDB 62.2230% -25 - C1 -4R8D - HIS8_MYCTU -
50 HHSearch 61.8130% -34 - C1 -1FG7 5.0 HIS8_ECOLI
58 HHSearch 61.6027% 6 - C1 -4WBT - ? -
15 PsiBlast_PDB 61.1828% -34 - C1 -1LC5 - COBD_SALTY -
13 PsiBlast_PDB 60.2131% -3 - C1 -3EUC - HIS82_CUPPJ -
14 PsiBlast_PDB 59.6128% -31 - C1 -1LKC 5.1 COBD_SALTY
20 PsiBlast_PDB 59.1230% -26 - C1 -4RAE - HIS8_MYCTU -
16 PsiBlast_PDB 58.1028% -28 - C1 -1LC7 - COBD_SALTY -
17 PsiBlast_PDB 57.2228% -30 - C1 -1LC8 7.9 COBD_SALTY
7 PsiBlast_PDB 57.1831% -1 - C1 -3CQ6 - HIS8_CORGL -
22 PsiBlast_CBE 57.1331% 3 - C1 -3CQ5 5.4 HIS8_CORGL
25 PsiBlast_CBE 56.9831% -0 - C1 -3CQ6 - HIS8_CORGL -
6 PsiBlast_PDB 56.9531% 2 - C1 -3CQ5 5.0 HIS8_CORGL
23 PsiBlast_CBE 56.0831% 3 - C1 -3CQ5 5.3 HIS8_CORGL
26 PsiBlast_CBE 36.4132% 37 - C1 -1UU2 4.7 HIS8_THEMA
27 PsiBlast_CBE 34.1732% 41 - C1 -1UU2 4.4 HIS8_THEMA