@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : bsu34950: (2016-07-29 )
MKKIVSILFMFGLVMGFSQFQPSTVFAADKVVHETIIVPKNTTYDGKGQRFVAGKELGDGSQSENQDPVFRVEDGATLKNVVLGAPAADGVHTYGNVNIQNVKWEDVGEDALTVKKEGKVTIDGGSAQKASDKIFQINKASTFTVKNFTADNGGKFIRQLGGSTFHVDVIIDKCTITNMKEAIFRTDSKTSTVRMTNTRYSNVGQKWIGVQHIYENNNTQF

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

UNG_A_11(4EW9)
?
[Raw transfer]
-
UNG_B_20(4EW9)
?
[Raw transfer]
-
ADA_B_(4YZA)
?
[Raw transfer]



ADA_B_(4YZ0)
?
[Raw transfer]



GTR_B_21(4Z03)
?
[Raw transfer]



DGU_A_12(4EW9)
?
[Raw transfer]



ADA_B_16(4Z06)
?
[Raw transfer]



X1X_A_14(4YZ0)
?
[Raw transfer]



DGU_B_21(4EW9)
?
[Raw transfer]



ADA_A_9(4Z03)
?
[Raw transfer]



ADA_B_24(4YZQ)
?
[Raw transfer]



ADA_A_15(4YZX)
?
[Raw transfer]



ADA_B_23(4Z03)
?
[Raw transfer]



ADA_A_12(4YZQ)
?
[Raw transfer]



ADA_B_26(4YZX)
?
[Raw transfer]



ADA_A_10(4Z03)
?
[Raw transfer]



ADA_A_17(4YZA)
?
[Raw transfer]



ADA_A_16(4YZ0)
?
[Raw transfer]



ADA_A_7(4Z06)
?
[Raw transfer]



MRD_B_16(3T9G)
?
[Raw transfer]
3 PsiBlast_PDB 90.0052% -84 - C2 -4EW9 4.0 ?
2 PsiBlast_PDB 89.5852% -84 - C2 -3T9G - ? -
6 PsiBlast_PDB 89.4950% -88 - C2 -4YZ0 4.5 ?
9 PsiBlast_PDB 89.3750% -88 - C2 -4YZA 3.0 ?
22 PsiBlast_CBE 89.0652% -84 - C2 -3T9G 3.9 ?
4 PsiBlast_PDB 89.0051% -85 - C2 -4Z03 3.4 ?
42 HHSearch 88.7847% -86 - C2 -4YZ0 3.0 ?
8 PsiBlast_PDB 88.7650% -84 - C2 -4YZQ 3.0 ?
21 PsiBlast_CBE 88.7452% -87 - C2 -4EW9 3.3 ?
29 PsiBlast_CBE 88.7150% -90 - C2 -4Z06 3.1 ?
7 PsiBlast_PDB 88.6850% -85 - C2 -4YZX 2.2 ?
10 PsiBlast_PDB 88.5650% -86 - C2 -4Z06 3.0 ?
5 PsiBlast_PDB 88.5451% -87 - C2 -4Z05 - ? -
24 PsiBlast_CBE 88.5351% -86 - C2 -4Z05 - ? -
23 PsiBlast_CBE 88.2551% -88 - C2 -4Z03 4.8 ?
26 PsiBlast_CBE 88.0950% -86 - C2 -4YZX 2.1 ?
28 PsiBlast_CBE 87.7850% -89 - C2 -4YZA 3.7 ?
27 PsiBlast_CBE 87.4350% -87 - C2 -4YZQ 3.0 ?
25 PsiBlast_CBE 87.3050% -86 - C2 -4YZ0 3.1 ?
33 Fugue 84.7558% 48 - C2 -1EE6 - ? -