@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : bsu35020: (2016-07-29 )
MKVMECQTYEELSQIAARITADTIKEKPDAVLGLATGGTPEGTYRQLIRLHQTENLSFQNITTVNLDEYAGLSSDDPNSYHFYMNDRFFQHIDSKPSRHFIPNGNADDLEAECRRYEQLVDSLGDTDIQLLGIGRNGHIGFNEPGTSFKSRTHVVTLNEQTRQANARYFPSIDSVPKKALTMGIQTILSSKRILLLISGKSKAEAVRKLLEGNISEDFPASALHLHSDVTVLIDREAASLRP

Atome Classification :

(31 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

F6R_A_3(2BKX)
NAGB_BACSU
[Raw transfer]




F6R_B_4(2BKX)
NAGB_BACSU
[Raw transfer]




F6R_A_3(2BKX)
NAGB_BACSU
[Raw transfer]




AGP_B_16(1HOR)
NAGB_ECOLI
[Raw transfer]




AGP_A_13(1HOR)
NAGB_ECOLI
[Raw transfer]




F6R_C_14(5HJ5)
NAGB_VIBCH
[Raw transfer]




F6R_B_10(5HJ5)
NAGB_VIBCH
[Raw transfer]




F6R_A_5(5HJ5)
NAGB_VIBCH
[Raw transfer]




F6R_D_17(5HJ5)
NAGB_VIBCH
[Raw transfer]




F6R_A_5(5HJ5)
NAGB_VIBCH
[Raw transfer]




FPC_A_10(1FQO)
NAGB_ECOLI
[Raw transfer]




F6R_B_16(1FQO)
NAGB_ECOLI
[Raw transfer]




FGS_A_4(2WU1)
NAGB_ECOLI
[Raw transfer]




GLP_A_3(2RI1)
NAGB_STRMU
[Raw transfer]




GLP_B_4(2RI1)
NAGB_STRMU
[Raw transfer]




PGA_A_3(2BKV)
NAGB_BACSU
[Raw transfer]




FGS_B_6(2WU1)
NAGB_ECOLI
[Raw transfer]




PGA_B_4(2BKV)
NAGB_BACSU
[Raw transfer]




FMT_B_8(4R7T)
NAGB_VIBCH
[Raw transfer]




TLA_A_5(1FS5)
NAGB_ECOLI
[Raw transfer]




22 PsiBlast_CBE 97.22100% -84 - C4 -2BKV 3.0 NAGB_BACSU
68 HHSearch 96.98100% -83 - C4 -2BKX 4.5 NAGB_BACSU
2 PsiBlast_PDB 96.98100% -83 - C4 -2BKX 4.5 NAGB_BACSU
21 PsiBlast_CBE 96.55100% -81 - C4 -2BKX 4.3 NAGB_BACSU
1 PsiBlast_PDB 96.08100% -86 - C4 -2BKV 2.5 NAGB_BACSU
70 HHSearch 77.2742%-103 - C4 -2RI0 - NAGB_STRMU -
4 PsiBlast_PDB 69.6941% -37 - C4 -2RI0 - NAGB_STRMU -
5 PsiBlast_PDB 69.4541% -39 - C4 -2RI1 3.7 NAGB_STRMU
29 PsiBlast_CBE 69.1741% -35 - C4 -2RI0 - NAGB_STRMU -
30 PsiBlast_CBE 68.9041% -34 - C4 -2RI1 3.4 NAGB_STRMU
23 PsiBlast_CBE 63.6841% 31 - C4 -4R7T - NAGB_VIBCH -
9 PsiBlast_PDB 62.1339% 33 - C4 -1CD5 - NAGB_ECOLI -
40 PsiBlast_CBE 61.5241% 42 - C4 -3HN6 - NAGB_BORBU -
15 PsiBlast_PDB 61.2439% 33 - C4 -2WU1 3.2 NAGB_ECOLI
49 Fugue 61.1439% 42 - C4 -1NE7 - GNPI1_HUMAN -
32 PsiBlast_CBE 61.1239% 34 - C4 -1HOT - NAGB_ECOLI -
37 PsiBlast_CBE 61.0739% 32 - C4 -1DEA - NAGB_ECOLI -
38 PsiBlast_CBE 61.0041% 45 - C4 -3HN6 - NAGB_BORBU -
24 PsiBlast_CBE 61.0041% 40 - C4 -4R7T 3.3 NAGB_VIBCH
14 PsiBlast_PDB 60.9739% 37 - C4 -1FSF - NAGB_ECOLI -
3 PsiBlast_PDB 60.8441% 40 - C4 -5HJ5 4.8 NAGB_VIBCH
27 PsiBlast_CBE 60.7841% 40 - C4 -5HJ5 4.9 NAGB_VIBCH
12 PsiBlast_PDB 60.7239% 31 - C4 -1FS5 3.5 NAGB_ECOLI
28 PsiBlast_CBE 60.5441% 40 - C4 -5HJ5 4.7 NAGB_VIBCH
10 PsiBlast_PDB 60.4839% 32 - C4 -1FQO 4.4 NAGB_ECOLI
33 PsiBlast_CBE 60.4739% 33 - C4 -1HOR 4.8 NAGB_ECOLI
31 PsiBlast_CBE 60.4639% 34 - C4 -2WU1 2.6 NAGB_ECOLI
26 PsiBlast_CBE 60.0541% 41 - C4 -5HJ5 4.7 NAGB_VIBCH
36 PsiBlast_CBE 60.0339% 33 - C4 -1FQO 4.2 NAGB_ECOLI
66 HHSearch 59.7640% 44 - C4 -5HJ5 4.8 NAGB_VIBCH
6 PsiBlast_PDB 59.4139% 37 - C4 -1HOR 4.5 NAGB_ECOLI