@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : bsu35940: (2016-07-30 )
MQIEMKDIHKTFGKNQVLSGVSFQLMPGEVHALMGENGAGKSTLMNILTGLHKADKGQISINGNETYFSNPKEAEQHGIAFIHQELNIWPEMTVLENLFIGKEISSKLGVLQTRKMKALAKEQFDKLSVSLSLDQEAGECSVGQQQMIEIAKALMTNAEVIIMDEPTAALTEREISKLFEVITALKKNGVSIVYISHRMEEIFAICDRITIMRDGKTVDTTNISETDFDEVVKKMVGRELTERYPKRTPSLGDKVFEVKNASVKGSFEDVSFYVRSGEIVGVSGLMGAGRTEMMRALFGVDRLDTGEIWIAGKKTAIKNPQEAVKKGLGFITENRKDEGLLLDTSIRENIALPNLSSFSPKGLIDHKREAEFVDLLIKRLTIKTASPETHARHLSGGNQQKVVIAKWIGIGPKVLILDEPTRGVDVGAKREIYTLMNELTERGVAIIMVSSELPEILGMSDRIIVVHEGRISGEIHAREATQERIMTLATGGR

Atome Classification :

(24 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

ATP_J_5(4YMU)
?
[Raw transfer]



ATP_J_5(4YMV)
?
[Raw transfer]



ADP_A_4(1G6H)
LIVG_METJA
[Raw transfer]



ADP_A_2(5DGX)

[Raw transfer]



ADP_A_2(4U00)
?
[Raw transfer]



ADP_B_10(1G9X)
LIVG_METJA
[Raw transfer]



ADP_A_8(1G9X)
LIVG_METJA
[Raw transfer]



ADP_C_12(1G9X)
LIVG_METJA
[Raw transfer]
39 HHSearch 66.9224% 41 - C1 -4F4C - PGP1_CAEEL -
41 HHSearch 64.0322% 23 - C1 -3BK7 - ? -
38 HHSearch 63.8723% 29 - C1 -4FIN - ETTA_ECOLI -
51 HHSearch 63.3426%-121 * C1 *4TQU - ? -
44 HHSearch 62.7820% -6 - C1 -2IW3 - EF3A_YEAST -
53 HHSearch 61.4929%-114 - C1 -4YER - ? -
55 HHSearch 60.8428%-109 - C1 -2IT1 - ? -
40 HHSearch 60.6019% 16 - C1 -3J16 - RLI1_YEAST -
43 HHSearch 55.9220% 39 - C1 -3OZX - ? -
33 Fugue 55.6619% 36 - C1 -3J16 - RLI1_YEAST -
42 HHSearch 54.2421% 15 - C1 -1YQT - ? -
57 HHSearch 53.8028%-113 - C1 -2YYZ - ? -
5 PsiBlast_PDB 53.2827%-124 - C1 -4U00 6.0 ?
3 PsiBlast_PDB 52.2435% -42 - C1 -1GAJ - LIVG_METJA -
12 PsiBlast_PDB 51.8029% -46 - C1 -2IT1 - ? -
6 PsiBlast_PDB 51.8027%-120 - C1 -4U02 - ? -
59 HHSearch 51.6624%-113 - C1 -1V43 - ? -
2 PsiBlast_PDB 50.8235% -53 - C1 -1G6H 6.6 LIVG_METJA
22 PsiBlast_CBE 48.3635% -56 - C1 -1G9X 5.8 LIVG_METJA
1 PsiBlast_PDB 46.3535% -42 - C1 -1G9X 4.9 LIVG_METJA
9 PsiBlast_PDB 44.6630% -42 - C1 -4YMU 6.4 ?
21 PsiBlast_CBE 44.3935% -43 - C1 -1G9X 4.4 LIVG_METJA
10 PsiBlast_PDB 44.3430% -45 - C1 -4YMV 5.3 ?
24 PsiBlast_CBE 40.5831% -78 - C1 -5DGX 6.4