@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : bsu36010: (2016-07-31 )
MTKATKEQKSLVKNRGAELVVDCLVEQGVTHVFGIPGAKIDAVFDALQDKGPEIIVARHEQNAAFMAQAVGRLTGKPGVVLVTSGPGASNLATGLLTANTEGDPVVALAGNVIRADRLKRTHQSLDNAALFQPITKYSVEVQDVKNIPEAVTNAFRIASAGQAGAAFVSFPQDVVNEVTNTKNVRAVAAPKLGPAADDAISAAIAKIQTAKLPVVLVGMKGGRPEAIKAVRKLLKKVQLPFVETYQAAGTLSRDLEDQYFGRIGLFRNQPGDLLLEQADVVLTIGYDPIEYDPKFWNINGDRTIIHLDEIIADIDHAYQPDLELIGDIPSTINHIEHDAVKVEFAEREQKILSDLKQYMHEGEQVPADWKSDRAHPLEIVKELRNAVDDHVTVTCDIGSHAIWMSRYFRSYEPLTLMISNGMQTLGVALPWAIGASLVKPGEKVVSVSGDGGFLFSAMELETAVRLKAPIVHIVWNDSTYDMVAFQQLKKYNRTSAVDFGNIDIVKYAESFGATGLRVESPDQLADVLRQGMNAEGPVIIDVPVDYSDNINLASDKLPKEFGELMKTKAL

Atome Classification :

(22 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

HE3_A_7(1OZG)
ILVB_KLEPN
[Raw transfer]




TPP_B_8(1OZF)
ILVB_KLEPN
[Raw transfer]




HE3_B_8(1OZG)
ILVB_KLEPN
[Raw transfer]




TPP_A_7(1OZF)
ILVB_KLEPN
[Raw transfer]




PEG_B_17(1OZF)
ILVB_KLEPN
[Raw transfer]




PEG_A_15(1OZF)
ILVB_KLEPN
[Raw transfer]




35 PsiBlast_CBE 88.4699% -96 - C5 -4RJI - ? -
28 PsiBlast_CBE 88.2899% -95 - C5 -4RJJ - ? -
29 PsiBlast_CBE 88.0299% -92 - C5 -4RJJ - ? -
34 PsiBlast_CBE 87.9899% -93 - C5 -4RJJ - ? -
32 PsiBlast_CBE 87.9299% -92 - C5 -4RJJ - ? -
1 PsiBlast_PDB 87.8499% -92 - C5 -4RJJ - ? -
33 PsiBlast_CBE 87.7699% -92 - C5 -4RJJ - ? -
37 PsiBlast_CBE 87.7599% -97 - C5 -4RJI - ? -
22 PsiBlast_CBE 87.5599% -94 - C5 -4RJK - ? -
2 PsiBlast_PDB 87.4699% -93 - C5 -4RJK - ? -
26 PsiBlast_CBE 87.3699% -92 - C5 -4RJK - ? -
36 PsiBlast_CBE 87.1099% -93 - C5 -4RJI - ? -
27 PsiBlast_CBE 86.6699% -92 - C5 -4RJK - ? -
25 PsiBlast_CBE 86.4299% -95 - C5 -4RJK - ? -
21 PsiBlast_CBE 86.3499% -96 - C5 -4RJK - ? -
3 PsiBlast_PDB 85.5399% -95 - C5 -4RJI - ? -
42 HHSearch 85.4099% -54 - C5 -4RJJ - ? -
39 PsiBlast_CBE 69.0151% -65 - C5 -1OZH - ILVB_KLEPN -
41 PsiBlast_CBE 68.8451% -65 - C5 -1OZF 5.5 ILVB_KLEPN
4 PsiBlast_PDB 68.8451% -63 - C5 -1OZG 5.3 ILVB_KLEPN
40 PsiBlast_CBE 68.6251% -67 - C5 -1OZG 6.3 ILVB_KLEPN
5 PsiBlast_PDB 68.3351% -64 - C5 -1OZF 5.7 ILVB_KLEPN