@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : bsu36410: (2016-07-31 )
MFARDIGIDLGTANVLIHVKGKGIVLNEPSVVALDKNSGKVLAVGEEARRMVGRTPGNIVAIRPLKDGVIADFEVTEAMLKHFINKLNVKGLFSKPRMLICCPTNITSVEQKAIKEAAEKSGGKHVYLEEEPKVAAIGAGMEIFQPSGNMVVDIGGGTTDIAVISMGDIVTSSSIKMAGDKFDMEILNYIKREYKLLIGERTAEDIKIKVATVFPDARHEEISIRGRDMVSGLPRTITVNSKEVEEALRESVAVIVQAAKQVLERTPPELSADIIDRGVIITGGGALLNGLDQLLAEELKVPVLVAENPMDCVAIGTGVMLDNMDKLPKRKLS

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

ANP_A_4(4CZJ)
?
[Raw transfer]



ADP_A_3(4CZF)
?
[Raw transfer]



ANP_B_6(4CZJ)
?
[Raw transfer]



ANP_A_3(1JCG)
?
[Raw transfer]



ADP_A_3(4CZG)
?
[Raw transfer]



ANP_A_3(4CZK)
?
[Raw transfer]



ADP_A_3(4CZG)
?
[Raw transfer]



ADP_A_3(4CZL)
?
[Raw transfer]



ADP_A_3(4CZH)
?
[Raw transfer]
3 PsiBlast_PDB 97.0351% -44 - C1 -2WUS - ? -
2 PsiBlast_PDB 94.5851% -36 - C1 -1JCG 6.8 ?
1 PsiBlast_PDB 94.4051% -36 - C1 -1JCF - ? -
4 PsiBlast_PDB 94.1950% -34 - C1 -1JCE - ? -
21 PsiBlast_CBE 87.5951% -2 - C1 -4CZJ 8.6 ?
7 PsiBlast_PDB 87.5051% 1 - C1 -4CZG 7.2 ?
8 PsiBlast_PDB 87.1051% 4 - C1 -4CZH 7.3 ?
10 PsiBlast_PDB 86.2851% -4 - C1 -4CZJ 8.4 ?
6 PsiBlast_PDB 86.2051% 0 - C1 -4CZF 7.4 ?
23 HHSearch 85.5350% -3 - C1 -1JCE - ? -
13 PsiBlast_PDB 85.5351% 1 - C1 -4CZM - ? -
5 PsiBlast_PDB 85.2951% -1 - C1 -4CZE - ? -
11 PsiBlast_PDB 85.0151% 1 - C1 -4CZK 7.3 ?
12 PsiBlast_PDB 84.6251% -1 - C1 -4CZL 7.2 ?
9 PsiBlast_PDB 84.5951% 1 - C1 -4CZI - ? -
22 PsiBlast_CBE 83.2551% 2 - C1 -4CZM - ? -
24 HHSearch 83.1850% 14 - C1 -4CZG 7.2 ?
43 HHSearch 50.1018% -1 - C1 -1K8K - ARP3_BOVIN -
28 HHSearch 49.2921% 0 - C- -4FL9 - HSP7C_BOVIN -
25 HHSearch 49.2120% 20 - C1 -3D2F - ? -