@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : bsu36890: (2016-08-01 )
MGKVYVFDHPLIQHKLTYIRNENTGTKDFRELVDEVATLMAFEITRDLPLEEVDINTPVQAAKSKVISGKKLGVVPILRAGLGMVDGILKLIPAAKVGHVGLYRDPETLKPVEYYVKLPSDVEEREFIVVDPMLATGGSAVEAIHSLKKRGAKNIRFMCLVAAPEGVEELQKHHSDVDIYIAALDEKLNEKGYIVPGLGDAGDRMFGTK

Atome Classification :

(46 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

U5P_C_3(1I5E)
UPP_BACCL
[Raw transfer]




U5P_C_3(1I5E)
UPP_BACCL
[Raw transfer]




U5P_D_4(1I5E)
UPP_BACCL
[Raw transfer]




U5P_H_8(1XTT)
UPP_SULSO
[Raw transfer]




U5P_G_7(1XTT)
UPP_SULSO
[Raw transfer]




U5P_A_12(1UPU)
UPP_TOXGO
[Raw transfer]




U5P_E_5(1XTT)
UPP_SULSO
[Raw transfer]




U5P_E_5(1XTT)
UPP_SULSO
[Raw transfer]




U5P_B_11(1UPU)
UPP_TOXGO
[Raw transfer]




U5P_D_9(1UPU)
UPP_TOXGO
[Raw transfer]




U5P_F_6(1XTT)
UPP_SULSO
[Raw transfer]




U5P_N_14(1O5O)
UPP_THEMA
[Raw transfer]




U5P_N_14(1O5O)
UPP_THEMA
[Raw transfer]




U5P_P_16(1O5O)
UPP_THEMA
[Raw transfer]




U5P_O_15(1O5O)
UPP_THEMA
[Raw transfer]




U5P_Q_17(1O5O)
UPP_THEMA
[Raw transfer]




U5P_C_10(1UPU)
UPP_TOXGO
[Raw transfer]




PRP_A_4(1VST)
UPP_SULSO
[Raw transfer]




PRP_A_7(3G6W)
UPP_SULSO
[Raw transfer]




PRP_B_16(1JLS)
UPP_TOXGO
[Raw transfer]




HSX_B_11(3G6W)
UPP_SULSO
[Raw transfer]




URA_A_16(1BD4)
UPP_TOXGO
[Raw transfer]




URA_D_18(1JLS)
UPP_TOXGO
[Raw transfer]




URA_D_13(1BD4)
UPP_TOXGO
[Raw transfer]




URA_C_14(1BD4)
UPP_TOXGO
[Raw transfer]




URA_A_17(1JLS)
UPP_TOXGO
[Raw transfer]




URF_A_20(1UPF)
UPP_TOXGO
[Raw transfer]




URA_B_15(1BD4)
UPP_TOXGO
[Raw transfer]




URF_B_19(1UPF)
UPP_TOXGO
[Raw transfer]




HSX_C_13(3G6W)
UPP_SULSO
[Raw transfer]




URA_C_19(1JLS)
UPP_TOXGO
[Raw transfer]




URF_D_17(1UPF)
UPP_TOXGO
[Raw transfer]




URF_C_18(1UPF)
UPP_TOXGO
[Raw transfer]




HSX_D_18(3G6W)
UPP_SULSO
[Raw transfer]




ACY_J_10(1XTT)
UPP_SULSO
[Raw transfer]




ACY_I_9(1XTT)
UPP_SULSO
[Raw transfer]




1 PsiBlast_PDB 97.1984%-164 - C6 -1I5E 5.6 UPP_BACCL
21 PsiBlast_CBE 96.8684%-164 - C6 -1I5E 5.6 UPP_BACCL
90 HHSearch 90.8883% -96 - C6 -1I5E 5.6 UPP_BACCL
87 HHSearch 88.0660%-161 - C6 -1V9S - UPP_THET2 -
2 PsiBlast_PDB 87.4758%-163 - C6 -1V9S - UPP_THET2 -
91 HHSearch 85.9858%-163 - C6 -1O5O 6.8 UPP_THEMA
3 PsiBlast_PDB 85.7257%-163 - C6 -1O5O 6.8 UPP_THEMA
22 PsiBlast_CBE 85.4857%-163 - C6 -1O5O 6.4 UPP_THEMA
24 PsiBlast_CBE 85.3657%-162 - C6 -1O5O 6.3 UPP_THEMA
89 HHSearch 84.7852%-144 - C6 -2EHJ - UPP_ECOLI -
23 PsiBlast_CBE 84.5257%-156 - C6 -1O5O 6.6 UPP_THEMA
4 PsiBlast_PDB 80.9255%-104 - C6 -3DMP - UPP_BURPS -
92 HHSearch 78.3455% -78 - C6 -3DMP - UPP_BURPS -
28 PsiBlast_CBE 76.5536%-148 - C6 -2E55 - UPP_AQUAE -
30 PsiBlast_CBE 76.4236%-146 - C6 -2E55 - UPP_AQUAE -
29 PsiBlast_CBE 76.1536%-152 - C6 -2E55 - UPP_AQUAE -
7 PsiBlast_PDB 76.1236%-146 - C6 -2E55 - UPP_AQUAE -
26 PsiBlast_CBE 75.5452% -52 - C6 -2EHJ - UPP_ECOLI -
5 PsiBlast_PDB 75.1852% -45 - C6 -2EHJ - UPP_ECOLI -
27 PsiBlast_CBE 74.8252% -47 - C6 -2EHJ - UPP_ECOLI -
31 PsiBlast_CBE 73.1436% -99 - C6 -1UPU 4.8 UPP_TOXGO
36 PsiBlast_CBE 72.4736% -92 - C6 -1UPF 3.3 UPP_TOXGO
45 PsiBlast_CBE 72.3136% -96 - C6 -1BD4 3.2 UPP_TOXGO
32 PsiBlast_CBE 72.1636% -97 - C6 -1UPU 4.8 UPP_TOXGO
33 PsiBlast_CBE 71.9736% -96 - C6 -1UPU 5.5 UPP_TOXGO
38 PsiBlast_CBE 71.8336% -95 - C6 -1JLS 3.0 UPP_TOXGO
8 PsiBlast_PDB 71.6736% -96 - C6 -1UPU 4.4 UPP_TOXGO
34 PsiBlast_CBE 71.3936% -96 - C6 -1UPF 2.9 UPP_TOXGO
43 PsiBlast_CBE 71.2136% -97 - C6 -1BD4 3.9 UPP_TOXGO
39 PsiBlast_CBE 71.0736%-100 - C6 -1JLS 3.3 UPP_TOXGO
11 PsiBlast_PDB 70.9536% -90 - C6 -1BD4 2.9 UPP_TOXGO
9 PsiBlast_PDB 70.6336% -99 - C6 -1UPF 4.3 UPP_TOXGO
44 PsiBlast_CBE 70.2436% -90 - C6 -1BD4 2.3 UPP_TOXGO
37 PsiBlast_CBE 69.9736% -94 - C6 -1JLS 3.1 UPP_TOXGO
12 PsiBlast_PDB 69.9036% -94 - C6 -1JLS 2.9 UPP_TOXGO
35 PsiBlast_CBE 69.4336% -94 - C6 -1UPF 2.8 UPP_TOXGO
51 PsiBlast_CBE 62.3531% -47 - C6 -3G6W 3.3 UPP_SULSO
63 PsiBlast_CBE 62.1131% -26 - C6 -1XTT 7.0 UPP_SULSO
14 PsiBlast_PDB 62.0131% -22 - C6 -1XTT 7.4 UPP_SULSO
18 PsiBlast_PDB 61.6331% -23 - C6 -3G6W 5.4 UPP_SULSO
50 PsiBlast_CBE 61.6031% -49 - C6 -3G6W 3.4 UPP_SULSO
17 PsiBlast_PDB 61.3031% -20 - C6 -1VST 5.1 UPP_SULSO
86 HHSearch 61.2533% -3 - C6 -1XTT 7.4 UPP_SULSO
49 PsiBlast_CBE 60.7231% -26 - C6 -3G6W 3.0 UPP_SULSO
64 PsiBlast_CBE 59.0731% -18 - C6 -1XTT 6.8 UPP_SULSO
62 PsiBlast_CBE 58.5331% -22 - C6 -1XTT 6.8 UPP_SULSO