@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : bsu37000: (2016-08-01 )
MKTIFEALKWASSYLTEAGREENAAELLLLYDTGMERSKLLASLQEPIGEDELYRFKRHVEMHKEGVPVQYIIGKEFFYGREFMVNDDVLIPRPETEEVVFHLLEKYRSVFSEDGKLEVVDVGTGSGAIAVTLALENQSFSVSAVDISKEALQVASANAEKLGANVRFYQGDLLEPFIKAGKKADIIVSNPPYISEEEMADLSEIVRFHEPLHALTDGGDGLKFYKRFMEDIPLVMKDKVFVVFEIGWKQGAAVKDLILKAFKGAEVEVLKDINGKDRTICALIHKNK

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

SAH_B_2(1NV9)
PRMC_THEMA
[Raw transfer]




SAH_B_2(1NV9)
PRMC_THEMA
[Raw transfer]




MEQ_B_6(1NV8)
PRMC_THEMA
[Raw transfer]




SAM_A_3(1VQ1)
PRMC_THEMA
[Raw transfer]




SAM_A_4(1SG9)
PRMC_THEMA
[Raw transfer]




SAM_A_3(1NV8)
PRMC_THEMA
[Raw transfer]




SAM_B_4(1NV8)
PRMC_THEMA
[Raw transfer]




GLN_A_7(1SG9)
PRMC_THEMA
[Raw transfer]




SAH_B_2(1T43)
PRMC_ECOLI
[Raw transfer]




SAH_B_2(1T43)
PRMC_ECOLI
[Raw transfer]




SAM_B_5(1SG9)
PRMC_THEMA
[Raw transfer]




SAH_C_3(2B3T)
PRMC_ECOLI
[Raw transfer]




SAM_C_6(1SG9)
PRMC_THEMA
[Raw transfer]




GLN_B_8(1SG9)
PRMC_THEMA
[Raw transfer]




MEQ_A_5(1NV8)
PRMC_THEMA
[Raw transfer]




127 Fugue 81.5430% -60 - C2 -1T43 6.3 PRMC_ECOLI
2 PsiBlast_PDB 77.8830% -62 * C2 *2B3T 4.6 PRMC_ECOLI
107 HHSearch 76.0829% -22 - C2 -2B3T - PRMC_ECOLI -
3 PsiBlast_PDB 74.3730% -56 - C2 -1T43 6.3 PRMC_ECOLI
128 Fugue 73.0833% 3 - C2 -1NV9 6.0 PRMC_THEMA
106 HHSearch 69.8634% 41 - C2 -1NV8 - PRMC_THEMA -
23 PsiBlast_CBE 65.8438% -5 - C2 -1NV8 7.2 PRMC_THEMA
21 PsiBlast_CBE 65.7338% -5 - C2 -1SG9 7.4 PRMC_THEMA
6 PsiBlast_PDB 65.2738% -4 - C2 -1NV9 6.0 PRMC_THEMA
4 PsiBlast_PDB 65.2038% -5 - C2 -1SG9 7.3 PRMC_THEMA
5 PsiBlast_PDB 64.9138% -10 - C2 -1NV8 7.4 PRMC_THEMA
22 PsiBlast_CBE 64.7438% -2 - C2 -1SG9 5.4 PRMC_THEMA
7 PsiBlast_PDB 62.0438% -8 - C2 -1VQ1 6.6 PRMC_THEMA
108 HHSearch 59.4341% -57 - C2 -4DZR - ? -
1 PsiBlast_PDB 58.3041% -69 - C2 -4DZR - ? -
131 Fugue 49.8920% -91 - C2 -3Q87 - ? -
113 HHSearch 48.3820% -94 - C2 -3EVZ - ? -
117 HHSearch 46.7018% -90 - C2 -2PJD - RSMC_ECOLI -
129 Fugue 46.5217% -3 - C2 -2H00 - MET16_HUMAN -
15 PsiBlast_PDB 45.3130%-100 - C2 -1WY7 - ? -