@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : bsu37050: (2016-08-01 )
MGYYLTWLTISRKKEICLNNIKKTKEGHLETTLRGKEVLSIPTLNKGVAFSLEERQELGLEGLLPPTVLSLDQQAQRAYEQFQAQPDRLRQNVYLSDLANRNEVLFYKLLKNHLREMLPVVYTPTVGEAIQEYSHEYRRPQGIYLSIDNIDGIEKAFENLHATAGDIDLIVATDSESILGIGDWGVGGINIAIGKLAVYTAAAGIDPSRVIPVVLDVGTNNEKLLNDPLYIGNKHERVQGERYEAFIDAYVKAALKFFPKALLHWEDLGNKNARNIMKKYNHEILTFNDDIQGTGAITLAGVLAAMKKTGASIKDQRVVIFGAGSAGIGIADQIRDTMVLAGLSEEEANKRFYTLDYRGLLTEDIEGILDFQKPYLRNADEVKDWKRDEKGQIPFDEVVRQAKPTILIGTSGVSGAFTEEIVKEMASHVDRPVIMPMSNPTHLAEAVPEDLFKWTDGKVLIATGSPFDNVEYNGVSYEIGQSNNAFAFPGLGLGSIVAEARIITPAMFAATADAIAEMVDLETPGAGLLPSIDKLQEVSIQVAIAVAEAAIKDGVANRQPEDVKQAVLDAMWTPEYKKVIAK

Atome Classification :

(24 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

NAD_F_6(1LLQ)
MAOM_ASCSU
[Raw transfer]




NAI_I_9(1O0S)
MAOM_ASCSU
[Raw transfer]




NAI_I_9(1O0S)
MAOM_ASCSU
[Raw transfer]




NAI_J_10(1O0S)
MAOM_ASCSU
[Raw transfer]




NAD_E_5(1LLQ)
MAOM_ASCSU
[Raw transfer]




NAD_A_3(1QR6)
MAOM_HUMAN
[Raw transfer]




NAD_E_5(1LLQ)
MAOM_ASCSU
[Raw transfer]




GOL_A_14(3NV9)
?
[Raw transfer]




30 HHSearch 85.9439% -58 - C2 -1GQ2 - MAOX_COLLI -
3 PsiBlast_PDB 85.0538% -57 - C2 -1GQ2 - MAOX_COLLI -
29 HHSearch 82.2740% -49 - C2 -1PJ3 - MAOM_HUMAN -
9 PsiBlast_PDB 81.7338% -43 - C2 -1EFL - MAOM_HUMAN -
25 PsiBlast_CBE 81.5739% -38 - C2 -1GZ3 - MAOM_HUMAN -
23 PsiBlast_CBE 81.5539% -39 - C2 -1GZ3 - MAOM_HUMAN -
15 PsiBlast_PDB 81.5538% -40 - C2 -1GZ4 - MAOM_HUMAN -
12 PsiBlast_PDB 81.5038% -41 - C2 -1PJ4 - MAOM_HUMAN -
7 PsiBlast_PDB 81.5038% -43 - C2 -1QR6 9.4 MAOM_HUMAN
11 PsiBlast_PDB 81.4138% -40 - C2 -1DO8 - MAOM_HUMAN -
6 PsiBlast_PDB 81.4039% -38 - C2 -1GZ3 - MAOM_HUMAN -
24 PsiBlast_CBE 81.2239% -38 - C2 -1GZ3 - MAOM_HUMAN -
14 PsiBlast_PDB 80.7638% -40 - C2 -1PJ3 - MAOM_HUMAN -
13 PsiBlast_PDB 80.7038% -42 - C2 -1PJ2 - MAOM_HUMAN -
8 PsiBlast_PDB 80.5538% -41 - C2 -1EFK - MAOM_HUMAN -
10 PsiBlast_PDB 80.3638% -43 - C2 -1PJL - MAOM_HUMAN -
5 PsiBlast_PDB 80.1938% -19 - C2 -3WJA - MAOX_HUMAN -
28 HHSearch 79.8341% -3 * C2 *1O0S 9.9 MAOM_ASCSU
4 PsiBlast_PDB 79.3837% -18 - C2 -2AW5 - MAOX_HUMAN -
2 PsiBlast_PDB 79.3141% 1 - C2 -1O0S 9.8 MAOM_ASCSU
22 PsiBlast_CBE 79.2441% -0 - C2 -1LLQ 3.5 MAOM_ASCSU
1 PsiBlast_PDB 79.1341% -0 - C2 -1LLQ 4.1 MAOM_ASCSU
21 PsiBlast_CBE 79.1241% -1 - C2 -1O0S 9.4 MAOM_ASCSU
49 Fugue 55.2837% -77 - C2 -1LLQ 8.6 MAOM_ASCSU