@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : bsu37060: (2016-08-01 )
MYIMKQSGWLELICGSMFSGKSEELIRRVKRATYAKQEVRVFKPVIDNRYSEAAVVSHNGTSMTSYAISSAADIWDHISESTDVVAVDEVQFFDQEIVEVLSSLADKGYRVIAAGLDMDFRGEPFGVVPNIMAIAESVTKLQAVCSVCGSPASRTQRLIDGKPASYDDPVILVGAAESYEARCRHHHEVPGKSKK

Atome Classification :

(44 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

4TA_B_7(2ORW)
KITH_THEMA
[Raw transfer]




4TA_B_6(2ORV)
KITH_HUMAN
[Raw transfer]




T5A_A_3(4UXH)
?
[Raw transfer]




4TA_B_7(2ORW)
KITH_THEMA
[Raw transfer]




4TA_A_5(2ORV)
KITH_HUMAN
[Raw transfer]




4TA_A_5(2ORV)
KITH_HUMAN
[Raw transfer]




4TA_B_7(2ORW)
KITH_THEMA
[Raw transfer]




TTP_B_9(2UZ3)
KITH_UREPA
[Raw transfer]




T5A_A_3(4UXH)
?
[Raw transfer]




TTP_B_13(4UXJ)
?
[Raw transfer]




TTP_D_14(2J87)
KITH_VACCA
[Raw transfer]




TTP_A_9(2WVJ)
KITH_HUMAN
[Raw transfer]




TTP_D_19(4UXJ)
?
[Raw transfer]




TTP_E_22(4UXJ)
?
[Raw transfer]




TTP_A_10(4UXJ)
?
[Raw transfer]




TTP_C_16(4UXJ)
?
[Raw transfer]




T5A_B_5(4UXH)
?
[Raw transfer]




TTP_B_8(2J87)
KITH_VACCA
[Raw transfer]




TTP_C_11(2UZ3)
KITH_UREPA
[Raw transfer]




TTP_D_14(2UZ3)
KITH_UREPA
[Raw transfer]




ANP_A_9(2QQ0)
KITH_THEMA
[Raw transfer]




TTP_A_3(2JA1)
KITH_BACCR
[Raw transfer]




ADP_A_5(1XX6)
KITH_CLOAB
[Raw transfer]




THM_A_3(2J9R)
KITH_BACAN
[Raw transfer]




ADP_B_10(2QQ0)
KITH_THEMA
[Raw transfer]




THM_A_3(2J9R)
KITH_BACAN
[Raw transfer]




THM_B_6(2QQE)
KITH_THEMA
[Raw transfer]




TTP_F_25(4UXJ)
?
[Raw transfer]




THM_A_5(2QQE)
KITH_THEMA
[Raw transfer]




THM_B_10(2B8T)
KITH_UREPA
[Raw transfer]




THM_A_9(2B8T)
KITH_UREPA
[Raw transfer]




THM_A_9(2B8T)
KITH_UREPA
[Raw transfer]




1 PsiBlast_PDB 91.6669%-108 - C10 -2JA1 7.7 KITH_BACCR
2 PsiBlast_PDB 84.4769%-119 - C10 -2J9R 5.7 KITH_BACAN
78 HHSearch 83.9570%-122 - C10 -2J9R 5.7 KITH_BACAN
76 HHSearch 83.9462%-106 - C10 -1XX6 8.7 KITH_CLOAB
22 PsiBlast_CBE 74.6846% -29 - C10 -2UZ3 9.5 KITH_UREPA
51 PsiBlast_CBE 73.8637%-135 - C10 -1XBT - KITH_HUMAN -
24 PsiBlast_CBE 73.4946% -24 - C10 -2UZ3 10.3 KITH_UREPA
12 PsiBlast_PDB 72.9937%-132 - C10 -1XBT - KITH_HUMAN -
3 PsiBlast_PDB 72.7646% -25 - C10 -2B8T 6.1 KITH_UREPA
41 PsiBlast_CBE 72.6337%-136 - C10 -1W4R - KITH_HUMAN -
50 PsiBlast_CBE 72.3637%-132 - C10 -1XBT - KITH_HUMAN -
73 HHSearch 72.3447% -24 - C10 -2B8T 6.1 KITH_UREPA
58 PsiBlast_CBE 72.3236%-133 - C10 -2WVJ - KITH_HUMAN -
43 PsiBlast_CBE 72.2537%-127 - C10 -1W4R - KITH_HUMAN -
57 PsiBlast_CBE 72.2036%-128 - C10 -2WVJ - KITH_HUMAN -
52 PsiBlast_CBE 71.9737%-134 - C10 -1XBT - KITH_HUMAN -
42 PsiBlast_CBE 71.8337%-133 - C10 -1W4R - KITH_HUMAN -
40 PsiBlast_CBE 71.6937%-130 - C10 -1W4R - KITH_HUMAN -
59 PsiBlast_CBE 71.6536%-133 - C10 -2WVJ - KITH_HUMAN -
46 PsiBlast_CBE 71.5837%-132 - C10 -1XBT - KITH_HUMAN -
14 PsiBlast_PDB 71.4236%-133 - C10 -2WVJ 8.1 KITH_HUMAN
53 PsiBlast_CBE 71.0737%-141 - C10 -2ORV 9.2 KITH_HUMAN
29 PsiBlast_CBE 70.8537%-132 - C10 -2ORW 10.6 KITH_THEMA
62 PsiBlast_CBE 70.5734%-125 - C10 -2J87 7.4 KITH_VACCA
60 PsiBlast_CBE 70.4534%-128 - C10 -2J87 8.5 KITH_VACCA
75 HHSearch 70.4038%-121 - C10 -2ORW 10.5 KITH_THEMA
6 PsiBlast_PDB 69.7737%-132 - C10 -2QQ0 8.3 KITH_THEMA
26 PsiBlast_CBE 69.5937%-134 - C10 -2QQ0 7.0 KITH_THEMA
7 PsiBlast_PDB 69.4837%-125 - C10 -2QQE 6.2 KITH_THEMA
4 PsiBlast_PDB 68.8237%-127 - C10 -2ORW 10.5 KITH_THEMA
77 HHSearch 68.7338%-140 * C10 *2ORV 9.4 KITH_HUMAN
23 PsiBlast_CBE 68.2946% -27 - C10 -2UZ3 9.2 KITH_UREPA
21 PsiBlast_CBE 68.0346% -28 - C10 -2B8T 6.1 KITH_UREPA
13 PsiBlast_PDB 67.9937%-133 - C10 -2ORV 9.4 KITH_HUMAN
25 PsiBlast_CBE 67.1737%-131 - C10 -2QQE 6.0 KITH_THEMA
79 HHSearch 63.3938% -57 - C10 -4UXH 12.1 ?
9 PsiBlast_PDB 63.2237% -27 - C10 -4UXH 12.1 ?
33 PsiBlast_CBE 61.2237% -19 - C10 -4UXJ 8.3 ?
8 PsiBlast_PDB 61.1737% -22 - C10 -4UXJ 8.7 ?
36 PsiBlast_CBE 59.7537% -27 - C10 -4UXJ 7.8 ?
38 PsiBlast_CBE 59.6737% -21 - C10 -4UXH 10.6 ?
35 PsiBlast_CBE 59.5937% -17 - C10 -4UXJ 9.0 ?
34 PsiBlast_CBE 59.2637% -21 - C10 -4UXJ 7.7 ?
32 PsiBlast_CBE 58.8837% -23 - C10 -4UXJ 3.4 ?