@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : bsu37120: (2016-08-01 )
MPLVSMTEMLNTAKEKGYAVGQFNLNNLEFTQAILQAAEEEKSPVILGVSEGAGRYMGGFKTVVAMVKALMEEYKVTVPVAIHLDHGSSFESCAKAIHAGFTSVMIDASHHPFEENVATTAKVVELAHFHGVSVEAELGTVGGQEDDVIAEGVIYADPKECQELVERTGIDCLAPALGSVHGPYKGEPNLGFKEMEEIGKSTGLPLVLHGGTGIPTADIKKSISLGTAKINVNTENQISSAKAVRETLAAKPDEYDPRKYLGPAREAIKETVIGKMREFGSSNQA

Atome Classification :

(21 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

TD4_B_10(3N9S)
?
[Raw transfer]




13P_A_8(3Q94)
?
[Raw transfer]




TD4_A_3(3N9S)
?
[Raw transfer]




13P_A_5(2FJK)
ALF_THECA
[Raw transfer]




PGH_A_3(1GVF)
KBAY_ECOLI
[Raw transfer]




PGH_B_12(1GVF)
KBAY_ECOLI
[Raw transfer]




PGH_A_3(1GVF)
KBAY_ECOLI
[Raw transfer]




PGH_B_6(2ISV)
?
[Raw transfer]




PGH_A_4(2ISW)
?
[Raw transfer]




PGH_A_4(2ISW)
?
[Raw transfer]




PGH_A_5(2ISV)
?
[Raw transfer]




PGH_A_9(3C52)
ALF_HELPY
[Raw transfer]




FLC_A_4(4TO8)
?
[Raw transfer]




FLC_B_6(4TO8)
?
[Raw transfer]




FLC_A_4(4TO8)
?
[Raw transfer]




EDO_B_20(1GVF)
KBAY_ECOLI
[Raw transfer]




2 PsiBlast_PDB 93.7577% -70 - C1 -3Q94 4.6 ?
21 PsiBlast_CBE 91.1679% -77 - C1 -4TO8 2.9 ?
61 HHSearch 90.6479% -77 - C1 -4TO8 3.0 ?
1 PsiBlast_PDB 90.6479% -77 - C1 -4TO8 3.0 ?
38 PsiBlast_CBE 83.0040% -99 - C1 -1GVF 3.7 KBAY_ECOLI
60 HHSearch 82.7340%-103 - C1 -1GVF 3.4 KBAY_ECOLI
14 PsiBlast_PDB 81.7240%-102 - C1 -1GVF 3.4 KBAY_ECOLI
8 PsiBlast_PDB 79.2642% -49 - C1 -3C56 - ALF_HELPY -
12 PsiBlast_PDB 78.8341% -78 - C1 -2ISV 3.2 ?
59 HHSearch 78.6846% -63 * C1 *2ISW 3.4 ?
34 PsiBlast_CBE 78.3742% -49 - C1 -3C56 - ALF_HELPY -
28 PsiBlast_CBE 78.1442% -50 - C1 -3N9S 4.5 ?
7 PsiBlast_PDB 78.0342% -49 - C1 -3C52 3.8 ALF_HELPY
37 PsiBlast_CBE 77.8841% -74 - C1 -2ISV 3.5 ?
6 PsiBlast_PDB 77.1842% -59 - C1 -3C4U - ALF_HELPY -
35 PsiBlast_CBE 77.1542% -56 - C1 -3C4U - ALF_HELPY -
13 PsiBlast_PDB 77.0741% -58 - C1 -2ISW 3.4 ?
63 HHSearch 77.0053% -31 - C1 -1RVG - ? -
36 PsiBlast_CBE 76.9441% -64 - C1 -3GAK - ? -
10 PsiBlast_PDB 76.8342% -42 - C1 -3N9S 4.5 ?
5 PsiBlast_PDB 73.7548% -33 - C1 -2FJK 4.2 ALF_THECA