@TOME V2.3
(Nov 2016)

Ref. - - Doc.
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : bsu37150: (2016-08-01 )
MTKYIFVTGGVVSSLGKGIVAASLGRLLKNRGLNVTIQKFDPYINVDPGTMSPYQHGEVFVTDDGAETDLDLGHYERFIDINLNKFSNVTTGKIYSTVLKKERRGDYLGGTVQVIPHITNELKDRVYRAGKETNADVVITEIGGTVGDIESLPFLEAIRQMKSDIGRENVMYIHCTLVPYIKAAGELKTKPTQHSVKELRSLGIQPNIIVVRTEMPISQDMKDKIALFCDIDTKAVIECEDADNLYSIPLELQKQGLDKLVCEHMKLACKEAEMSEWKELVNKVSNLSQTITIGLVGKYVELPDAYISVVESLRHAGYAFDTDVKVKWINAEEVTENNIAELTSGTDGIIVPGGFGDRGVEGKIVATKYARENNIPFLGICLGMQVASIEYARNVLGLKGAHSAEIDPSTQYPIIDLLPEQKDVEDLGGTLRLGLYPCKLEEGTKAFEVYQDEVVYERHRHRYEFNNEFRQQMEEQGFVFSGTSPDGRLVEIIELKDHPWFVASQFHPEFKSRPTRPQPLFKGFIGASVEAANQK

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

ACP_A_4(4ZDK)
PYRG_MYCTU
[Raw transfer]



ACP_B_8(4ZDK)
PYRG_MYCTU
[Raw transfer]



UTP_A_3(4ZDJ)
PYRG_MYCTU
[Raw transfer]



UTP_A_3(4ZDJ)
PYRG_MYCTU
[Raw transfer]



ADP_B_5(3IHL)
PYRG2_HUMAN
[Raw transfer]
4 PsiBlast_PDB 83.8453% -33 - C3 -3NVA - PYRG_SULSO -
31 HHSearch 82.0853% -25 - C3 -3NVA - PYRG_SULSO -
58 Fugue 80.1557% 3 - C3 -1S1M - PYRG_ECOLI -
3 PsiBlast_PDB 79.4453% -1 - C3 -4ZDJ 4.5 PYRG_MYCTU
1 PsiBlast_PDB 78.9353% -1 - C3 -4ZDK 5.8 PYRG_MYCTU
16 PsiBlast_CBE 78.8053% -2 - C3 -4ZDK 5.0 PYRG_MYCTU
21 PsiBlast_CBE 78.1953% -0 - C3 -4ZDI - PYRG_MYCTU -
23 PsiBlast_CBE 78.1353% 3 - C3 -4ZDI - PYRG_MYCTU -
2 PsiBlast_PDB 77.9553% -1 - C3 -4ZDI - PYRG_MYCTU -
20 PsiBlast_CBE 77.8553% -1 - C3 -4ZDI - PYRG_MYCTU -
18 PsiBlast_CBE 77.6753% 2 - C3 -4ZDI - PYRG_MYCTU -
22 PsiBlast_CBE 77.3653% -1 - C3 -4ZDI - PYRG_MYCTU -
19 PsiBlast_CBE 77.1953% 1 - C3 -4ZDI - PYRG_MYCTU -
17 PsiBlast_CBE 77.1853% 1 - C3 -4ZDI - PYRG_MYCTU -
32 HHSearch 77.0155% 13 * C3 *4ZDJ 4.5 PYRG_MYCTU
5 PsiBlast_PDB 50.1141% -4 - C3 -2VKT - PYRG2_HUMAN -
6 PsiBlast_PDB 47.6541% 12 - C3 -2V4U - PYRG2_HUMAN -
35 HHSearch 47.3242% 5 - C3 -2V4U - PYRG2_HUMAN -
24 PsiBlast_CBE 42.1552% 1 - C3 -3IHL 5.7 PYRG2_HUMAN
64 Fugue 35.7214% -64 - C4 -1DLJ - UDG_STRPY -