@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : bsu37170: (2016-08-01 )
MNFSLSEEHEMIRKLVRDFAKHEVAPTAAERDEQERFDRELFREMANLGLTGIPWPEDYGGIGSDYLAYVIAVEELSKVCASTGVTLSAHISLCSWPLFAFGTEEQKTEYLTQLALGEKIGAFALTEAGSGSDAGSMKTTAERIGDDYVLNGSKVFITNGGVADIYIVFAVTDPEKKKKGVTAFIVEKDFEGFFTGKKEKKLGIRSSPTTEIMFEDCVVPASKRLGEEGEGFKIAMKTLDGGRNGIAAQAVGIAQGALDAALQYAKERKQFGKSIAEQQGIAFKLADMATMIEASRLLTYQAAWLESSGLPYGKASAMSKLMAGDTAMKVTTEAVQIFGGYGYTKDYPVERYMRDAKITQIYEGTQEIQRLVISRMLAD

Atome Classification :

(37 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

FAD_A_4(1UKW)
?
[Raw transfer]




FAD_B_5(1UKW)
?
[Raw transfer]




FAD_A_4(1UKW)
?
[Raw transfer]




FDA_A_3(4N5F)
?
[Raw transfer]




FAD_A_3(2D29)
?
[Raw transfer]




FAD_A_3(2D29)
?
[Raw transfer]




FAD_B_4(2D29)
?
[Raw transfer]




FAD_B_11(3MDE)
ACADM_PIG
[Raw transfer]




FAD_A_9(3MDE)
ACADM_PIG
[Raw transfer]




FAD_A_3(3NF4)
?
[Raw transfer]




FAD_B_7(3MDD)
ACADM_PIG
[Raw transfer]




FAD_C_3(2DVL)
?
[Raw transfer]




FAD_E_5(1SIQ)
GCDH_HUMAN
[Raw transfer]




FAD_A_5(3MDD)
ACADM_PIG
[Raw transfer]




FAD_D_4(2DVL)
?
[Raw transfer]




FDA_B_15(4N5F)
?
[Raw transfer]




CAA_B_7(1BUC)
ACDS_MEGEL
[Raw transfer]




COS_A_4(4L1F)
?
[Raw transfer]




COS_B_9(4L1F)
?
[Raw transfer]




CAA_G_7(1JQI)
ACADS_RAT
[Raw transfer]




CAA_A_5(1BUC)
ACDS_MEGEL
[Raw transfer]




CAA_A_5(1BUC)
ACDS_MEGEL
[Raw transfer]




CAA_A_5(1BUC)
ACDS_MEGEL
[Raw transfer]




23 PsiBlast_CBE 89.7050% -74 - C1 -1JQI 5.7 ACADS_RAT
21 PsiBlast_CBE 88.9557% -74 - C1 -4L1F 6.7 ?
117 HHSearch 88.7457% -74 - C1 -4L1F 7.0 ?
1 PsiBlast_PDB 88.5657% -74 - C1 -4L1F - ? -
3 PsiBlast_PDB 87.7750% -71 - C1 -1JQI - ACADS_RAT -
5 PsiBlast_PDB 86.6450% -78 - C1 -2VIG - ACADS_HUMAN -
31 PsiBlast_CBE 85.8950% -79 - C1 -2VIG - ACADS_HUMAN -
32 PsiBlast_CBE 85.8350% -80 - C1 -2VIG - ACADS_HUMAN -
40 PsiBlast_CBE 85.8247% -75 - C1 -1UKW 9.0 ?
29 PsiBlast_CBE 85.7150% -79 - C1 -2VIG - ACADS_HUMAN -
30 PsiBlast_CBE 85.4850% -78 - C1 -2VIG - ACADS_HUMAN -
27 PsiBlast_CBE 85.4450% -75 - C1 -2VIG - ACADS_HUMAN -
28 PsiBlast_CBE 85.1550% -80 - C1 -2VIG - ACADS_HUMAN -
33 PsiBlast_CBE 85.1150% -81 - C1 -2VIG - ACADS_HUMAN -
26 PsiBlast_CBE 85.0653% -66 - C1 -3PFD - ? -
127 HHSearch 84.9248% -75 - C1 -1UKW 9.8 ?
9 PsiBlast_PDB 84.9047% -76 - C1 -1UKW 10.0 ?
38 PsiBlast_CBE 84.2849% -78 - C1 -4M9A - ? -
4 PsiBlast_PDB 84.1353% -66 - C1 -3PFD - ? -
24 PsiBlast_CBE 83.6453% -67 - C1 -3PFD - ? -
6 PsiBlast_PDB 82.5148% -81 - C1 -4N5F 9.9 ?
51 PsiBlast_CBE 82.2045% -82 - C1 -2DVL 9.2 ?
13 PsiBlast_PDB 81.9745% -81 - C1 -2DVL 8.7 ?
52 PsiBlast_CBE 79.5246% -38 - C1 -2D29 9.1 ?
126 HHSearch 79.3647% -35 - C1 -2D29 8.7 ?
34 PsiBlast_CBE 79.1148% -88 - C1 -4N5F 8.1 ?
114 HHSearch 78.8245% -81 - C1 -3NF4 8.1 ?
16 PsiBlast_PDB 78.3746% -34 - C1 -2D29 8.7 ?
128 HHSearch 77.8654% -6 - C1 -1BUC 5.0 ACDS_MEGEL
22 PsiBlast_CBE 77.1054% -1 - C1 -1BUC 5.4 ACDS_MEGEL
2 PsiBlast_PDB 75.8054% -4 - C1 -1BUC 5.4 ACDS_MEGEL
103 Fugue 74.5954% 13 - C1 -1BUC 5.0 ACDS_MEGEL
58 PsiBlast_CBE 74.0343% -24 - C1 -3MDE 9.1 ACADM_PIG
18 PsiBlast_PDB 72.8843% -22 - C1 -3MDD 7.6 ACADM_PIG
59 PsiBlast_CBE 72.5943% -19 - C1 -3MDD 7.8 ACADM_PIG
19 PsiBlast_PDB 71.2343% -22 - C1 -3MDE 7.0 ACADM_PIG
118 HHSearch 66.6932% -30 - C1 -1SIQ 7.6 GCDH_HUMAN