@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : bsu37370: (2016-08-02 )
MFIEQMFPFINESVRVHQLPEGGVLEIDYLRDNVSISDFEYLDLNKTAYELCMRMDGQKTAEQILAEQCAVYDESPEDHKDWYYDMLNMLQNKQVIQLGNRASRHTITTSGSNEFPMPLHATFELTHRCNLKCAHCYLESSPEALGTVSIEQFKKTADMLFDNGVLTCEITGGEIFVHPNANEILDYVCKKFKKVAVLTNGTLMRKESLELLKTYKQKIIVGISLDSVNSEVHDSFRGRKGSFAQTCKTIKLLSDHGIFVRVAMSVFEKNMWEIHDMAQKVRDLGAKAFSYNWVDDFGRGRDIVHPTKDAEQHRKFMEYEQHVIDEFKDLIPIIPYERKRAANCGAGWKSIVISPFGEVRPCALFPKEFSLGNIFHDSYESIFNSPLVHKLWQAQAPRFSEHCMKDKCPFSGYCGGCYLKGLNSNKYHRKNICSWAKNEQLEDVVQLI

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

SF4_A_7(1TV8)
MOAA_STAA8
[Raw transfer]
42 Fugue 70.1318% 32 - C5 -4K36 - ANSME_CLOP1 -
17 HHSearch 68.7219% 23 - C5 -4K36 - ANSME_CLOP1 -
9 PsiBlast_PDB 66.7820% 15 - C5 -4K37 - ANSME_CLOP1 -
14 PsiBlast_PDB 66.3420% 20 - C5 -4K36 - ANSME_CLOP1 -
11 PsiBlast_PDB 65.9620% 16 - C5 -4K39 - ANSME_CLOP1 -
10 PsiBlast_PDB 65.0520% 30 - C5 -4K38 - ANSME_CLOP1 -
41 Fugue 58.4518% 18 - C5 -1TV8 - MOAA_STAA8 -
18 HHSearch 54.8116% 4 * C5 *1TV8 3.3 MOAA_STAA8
46 Fugue 53.1116% 9 - C5 -1A4M - ADA_MOUSE -
45 Fugue 49.4912% -6 - C5 -3T7V - PYLB_METBF -
19 HHSearch 45.9316% -4 - C5 -4M7T - BTRN_BACCI -
38 HHSearch 45.1119%-167 - C5 -3G2B - PQQD_XANCP -
49 Fugue 44.4316% 6 - C3 -4X8E - EGTB_MYCTH -
3 PsiBlast_PDB 42.8522% -8 - C5 -1TV8 - MOAA_STAA8 -
44 Fugue 42.3814% 3 - C5 -3C8F - PFLA_ECOLI -
22 HHSearch 42.3815% -25 - C5 -2A5H - KAMA_CLOSU -
4 PsiBlast_PDB 41.9422% -1 - C5 -2FB3 - MOAA_STAA8 -
21 HHSearch 41.7718% 0 - C5 -3C8F - PFLA_ECOLI -
1 PsiBlast_PDB 41.2322% -7 - C5 -2FB2 - MOAA_STAA8 -
33 HHSearch 40.8518% -9 - C5 -4RTB - ? -