@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : bsu37540: (2016-08-02 )
MPYVTVKMLEGRTDEQKRNLVEKVTEAVKETTGASEEKIVVFIEEMRKDHYAVAGKRLSDME

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

FHC_A_3(2OPA)
4OT_BACSU
[Raw transfer]




FHC_A_3(2OPA)
4OT_BACSU
[Raw transfer]




2 PsiBlast_PDB 84.28100%-110 - C2 -2OPA 3.2 4OT_BACSU
1 PsiBlast_PDB 82.20100%-106 - C2 -2OP8 - 4OT_BACSU -
84 HHSearch 82.01100%-110 - C2 -2OPA 3.2 4OT_BACSU
21 PsiBlast_CBE 76.80100%-105 - C2 -2OPA - 4OT_BACSU -
22 PsiBlast_CBE 68.7661%-140 - C2 -2X4K - Y1376_STAAR -
16 PsiBlast_PDB 65.8836%-166 - C2 -5CLN - ? -
79 HHSearch 64.6262%-109 - C2 -2X4K - Y1376_STAAR -
3 PsiBlast_PDB 64.4161%-109 - C2 -2X4K - Y1376_STAAR -
88 HHSearch 61.2532%-110 - C2 -3RY0 - ? -
4 PsiBlast_PDB 61.1940%-142 - C2 -4FAZ - ? -
80 HHSearch 60.8437%-141 - C2 -4X1C - 4OT1_PSEPU -
62 PsiBlast_CBE 60.5936%-155 - C2 -5CLO - ? -
12 PsiBlast_PDB 60.4838%-147 - C2 -4X1C - 4OT1_PSEPU -
7 PsiBlast_PDB 59.9438%-135 - C2 -1BJP - 4OT1_PSEPU -
72 PsiBlast_CBE 59.8936%-117 - C2 -1S0Y - ? -
14 PsiBlast_PDB 58.9837%-120 - C2 -2FM7 - 4OT1_PSEPU -
77 HHSearch 58.7826%-131 - C2 -3MB2 - ? -
68 PsiBlast_CBE 58.5336%-101 - C2 -3EJ3 - ? -
52 PsiBlast_CBE 57.9938%-145 - C2 -1BJP - 4OT1_PSEPU -
98 Fugue 57.2738%-133 - C2 -1OTF - 4OT_PSEUF -